Candidatus Electrothrix aestuarii: Q3M24_00950
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Entry
Q3M24_00950 CDS
T10293
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eaj Candidatus Electrothrix aestuarii
Pathway
eaj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eaj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q3M24_00950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaj03021
]
Q3M24_00950
03400 DNA repair and recombination proteins [BR:
eaj03400
]
Q3M24_00950
Enzymes [BR:
eaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q3M24_00950
Transcription machinery [BR:
eaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q3M24_00950
DNA repair and recombination proteins [BR:
eaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q3M24_00950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
XCN73353
UniProt:
A0AAU8LWV6
LinkDB
All DBs
Position
complement(194174..195220)
Genome browser
AA seq
348 aa
AA seq
DB search
MEQEIRDDNPFYRNWHDLVAPERLEVTRDSHTDKYGKFICQPLERGFAATIGNALRRILL
SSIRGAAITSVRIEGADHEFTTIDGVHEDVADIILNLKQVQLKLNSPETRTVIIEKTGKG
VVTAGDINGNDKVEVMNPEQPICTVTGDTTTFRAELEVQWGKGYVPAEWNKKENRPLGVI
PIDAAFSPVLRIQYVVSQARVGQRTDYDRLTIEIETDGSVLPENALAYAAKILKEQMTIF
INFNEQEAVAPERGEGDGDGQDYPDFLDKNVEDLELSVRSANCLKNANIQYIGQLVQKTD
AEMLKTKNFGRKSLNEIKALLSQHDLTLNMNHEGWVAPCERDDADSEG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggaaattcgggatgataatcccttttacagaaactggcatgaccttgttgct
ccggaacgtctggaggttaccagggatagtcatacagataagtatggcaaattcatctgc
cagcccttagaacgcggttttgcagcaaccatagggaacgccttacgcaggattcttctt
tcctctatcagaggggctgcaattacatcggtccggattgagggagctgatcatgagttt
accacaattgacggagtgcatgaagacgtcgctgatattatactgaacctgaagcaggtt
cagctgaagctcaactctcctgagaccagaactgtcatcatagaaaagactggaaaaggc
gtagtcactgccggagacattaacggcaatgataaggtagaggtcatgaatccggaacag
ccgatttgtacggtaaccggtgataccacgacctttcgtgctgagcttgaagtacagtgg
ggtaaaggctatgtcccggcagagtggaataaaaaggaaaatcgtccgctcggtgtgatt
cctatagatgctgctttttctccggtactccgtattcagtacgtggtaagtcaggctcgt
gttggtcaacggacagattatgatcgtttgactattgaaatagagaccgatggttcggtt
ctgccagagaatgcccttgcctatgcggcaaagattctcaaagagcaaatgacgatcttt
atcaactttaatgagcaggaggctgtagctcctgagcgaggagaaggtgatggtgatggt
caggactatcccgatttccttgataagaatgttgaggatcttgagctctcagtccgttcc
gcgaactgtctgaagaatgccaatatacagtatatcggtcaattggtacagaaaaccgat
gctgaaatgctgaaaacgaaaaactttggtcgcaaatcactgaacgagattaaagcactt
ctttcacaacatgatcttaccttgaacatgaatcatgagggttgggtcgcaccgtgtgag
cgagatgatgctgatagcgaaggctaa
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