Candidatus Electrothrix aestuarii: Q3M24_08410
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Entry
Q3M24_08410 CDS
T10293
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eaj Candidatus Electrothrix aestuarii
Pathway
eaj03030
DNA replication
eaj03430
Mismatch repair
eaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q3M24_08410 (dnaE)
03430 Mismatch repair
Q3M24_08410 (dnaE)
03440 Homologous recombination
Q3M24_08410 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eaj03032
]
Q3M24_08410 (dnaE)
03400 DNA repair and recombination proteins [BR:
eaj03400
]
Q3M24_08410 (dnaE)
Enzymes [BR:
eaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q3M24_08410 (dnaE)
DNA replication proteins [BR:
eaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q3M24_08410 (dnaE)
DNA repair and recombination proteins [BR:
eaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q3M24_08410 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XCN74751
UniProt:
A0AAU8M0X5
LinkDB
All DBs
Position
1805195..1808716
Genome browser
AA seq
1173 aa
AA seq
DB search
MTTPFVHLHVHTQYSMLDGAIRLGDLIDKTQSYGMNAVAVTDHGAMYGALEFYTKANKAG
IKPLVGCEFYISETDHLIHDKSAGHNFHIVLLAMNETGYRNLMKLASIAQTAGFYYRPRI
DRKLLFAHQEGLIALTACLHGEIPWTISHQGLGKAKEKALGLQQVFGDRLYFEIQENGIP
EQRTVNDGLMELGNDLGIKLVATNDCHYLNREESYAHEVLLCIQTSKTINDANRFKFSTD
ELYFKPPDVMAEQFSYCPEALANTLEVAERCNLELEFNDHHFPIFPVPEGESLESLFEQA
CRDGLEQRLDHLRSLQEVSPELEQQYRDRLDMEIGVIQEMGFSGYFLIVADFINWAKSQK
IPVGPGRGSGAGSLAAFCMSITDIDPIPYGLLFERFLNVERVSMPDFDVDFCKERRDEVI
DYVRRRYGGDDHVAQIVAYGSMKARAVLRDVGRVLEVPLPVVDKIAKLVPDELKITLKKA
IDKEPRLRDAMQQDPAVRELLTVAQTLEGLSRHKSTHAAGVVVSPKAMVEYLPVCVGSKK
EILTQYDMKFTEMTGLIKFDFLGLKTLTVIDRALRLIKQDIGTEVDLSKIAMDDQRTYDL
LCAGNSLGVFQLESDGMRELLIKMAPEQFTDLIALVALYRPGPLDSGMVDQFVETKHGRR
PPEYPLPQIKPVLEETYGVIVYQEQVMKISNILASYSLGDADILRRAMGKKIPEVMEEER
GKFMAGARGNNIPEEKAAYVFDLMAKFAGYGFNKSHSAAYALVAYHTAYLKAHYPAQFLA
ALLSCDVDNTDKVVKYINECKQMSIPVLPPDINESHKDFTVINDRVRFGLGAVKNVGGSA
LDSMIKEREENGPYTSLADFCGRVDSSKVNRKVLENLIKAGALDSLQVKRAQLMEVLDQA
LEQAKAVQRDRLSGQMNLFAVAGAGEGGNNQAAAEIKFPDMPEWPNLKRLSYEKETIGFF
LTGHPLDGVIDTIRMVADADIAALENWREGQAVRIGGLIQQYKEHISKKGDRMAFTVLED
MSSSVEVIVFPETFARCSQFLGKDEPLIVLGTIQQGERGAKVIAEDIYPLGKAMEQFTEQ
AAIRLPADRISRNQLVELKELIYQFHGATPIKLTLHFDGRGEVDILPMKDITVRPCPDFF
NKVKASFGPRCLSMQMRQAEVQRKKRFGGGRDR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccccctttgtccatctccacgtccacacccagtactccatgctcgacggggct
attcgccttggcgacctgattgataaaacccagtcctacggcatgaacgctgtggcggtt
accgatcacggggccatgtacggtgccctggagttctacaccaaggctaataaggccggg
atcaagccattagtgggctgcgagttctatatctcggagaccgaccatctcatccatgac
aagagcgcaggccataatttccatattgtgctcctggccatgaacgagaccggttatcgc
aatctgatgaagctggcctccattgcccagactgccggattttattacaggcctcgcatt
gaccgcaaactgctctttgcccaccaggaggggctgattgctctgactgcctgcctgcac
ggtgaaatcccctggaccatcagccatcaagggctgggaaaggccaaggaaaaggctctc
ggtttacagcaggtctttggtgatcgcctctactttgagatccaggaaaacggtatcccg
gagcaacgaacggtcaatgatggcctgatggagctgggcaatgacttagggattaagctg
gtggccaccaatgactgccattacctcaaccgggaagagtcctacgcccacgaggtcctg
ctttgtattcagaccagcaagaccatcaacgatgccaatcgttttaaattttccactgac
gagctctatttcaagccaccggatgtcatggccgagcagtttagctattgccctgaggcc
ctggcaaataccctggaggtggcggagcgctgtaaccttgagcttgaattcaacgatcat
cattttcccatctttccagtaccagagggggaatccctggaaagcctgtttgagcaggct
tgtcgggacggtctggagcaacggcttgatcatcttcgcagcctccaggaggtcagcccg
gagctggagcaacagtaccgtgatcggctggatatggagatcggggttattcaggaaatg
ggtttttccggttacttccttattgtggctgatttcatcaactgggccaagagtcagaag
atccctgttggtcctggccgtggttccggggcaggcagtctggctgccttttgcatgtcc
atcactgatattgatcccatcccctatggcctcctctttgagcgtttcctgaacgtggag
cgggtttccatgcctgactttgacgtggatttctgcaaggagcggcgggacgaggtgatc
gactatgtccgccgccgctacggtggtgacgaccatgtggcacagatcgtggcctacggt
tccatgaaggccagggccgtgcttcgggatgtgggccgggttttagaggtgcccctgcct
gttgtggataagattgccaaactggtcccagatgagctgaagatcaccctgaaaaaggct
atcgacaaggagccccgtcttcgggatgccatgcagcaggatccggctgtgcgggagctc
ctcaccgtggcccaaaccttggagggactgtcccgtcataaatccactcatgcggccggg
gtggtggtctcgcccaaggcgatggtggagtatctgccggtctgtgttggctccaaaaag
gagatcctgacccagtacgatatgaagttcaccgagatgaccgggctgatcaagttcgac
tttctcggtctgaagaccctgaccgttattgaccgggccttgcgtctgatcaagcaggac
atcggtactgaggtggacctgagtaaaattgcgatggatgatcagcgcacctacgatctc
ctctgcgcaggcaacagtctgggcgtgtttcaattggagagcgacgggatgcgggagctg
ttgatcaagatggcaccggagcagtttacggacctgatcgccctggtagccctgtatcgg
cctggccccttggattccggcatggtggatcaatttgttgagaccaagcacggtcgccgt
ccgccagagtacccgctgccccagattaagcctgtcctggaagagacctacggggttatc
gtctaccaggaacaggttatgaagatctccaatatcctggcctcctacagcctgggtgat
gcggatatcctccgccgggctatgggaaagaagatccccgaggttatggaggaagagcgg
ggtaagttcatggccggggcccggggcaataatatcccggaagaaaaggcagcctacgtc
tttgacctgatggccaagtttgcgggttatggcttcaataaatcccattctgccgcctat
gccctggtggcctaccatactgcctatctcaaggcccattatccggcccaattcctggct
gccctgctttcctgtgatgttgataacacggacaaggtagtcaagtacatcaacgagtgc
aagcagatgtccatcccggttttgccgccggatatcaacgagtcccataaagatttcacg
gttatcaacgatagggttcgttttggactgggggctgtgaagaatgtgggtggttcagcc
ctggattctatgatcaaggagagggaggaaaacggcccttatacctccttagcggatttc
tgcggtcgggttgattccagtaaggtgaatcgtaaggtcctggagaatctcattaaggcc
ggggcccttgactccttgcaggtgaaacgggcccagcttatggaggtcttggatcaggcc
ctggagcaggccaaggccgtgcagcgggatcgcctcagtggccagatgaatctctttgct
gtggcgggcgcaggggaaggaggaaataatcaggcagcagcagagattaaatttcccgat
atgccagagtggccgaacctgaagaggctttcctatgagaaggagaccataggcttcttt
ctgaccgggcaccctctggacggggtgattgataccatccgcatggttgctgatgcagat
atcgctgccttagaaaattggcgggaaggacaggcggtccgtatcggaggcctgattcag
cagtacaaggagcatatctccaagaagggtgaccggatggcctttacggtgttggaggat
atgagttccagcgttgaggtcattgtttttcctgagacctttgcccggtgctctcaattt
cttggtaaggacgagcccctgattgtccttggtactatccagcagggggagcggggtgcc
aaggtcattgcggaggatatctatccgttgggtaaggcaatggaacaatttaccgagcag
gctgcaatccgtttgcctgccgacagaatcagcaggaatcagcttgttgagctgaaggaa
ttgatctatcaattccacggtgccacccccatcaagttgactcttcatttcgatgggaga
ggtgaggtggatatcctgcccatgaaggatatcacggttcggccatgcccggattttttc
aataaggtcaaggcctcctttggtccgcgatgtttgtctatgcagatgcgccaggctgag
gtgcagcggaagaagcgattcgggggaggaagagaccggtag
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