Candidatus Electrothrix aestuarii: Q3M24_09830
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Entry
Q3M24_09830 CDS
T10293
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
eaj Candidatus Electrothrix aestuarii
Brite
KEGG Orthology (KO) [BR:
eaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eaj03016
]
Q3M24_09830
Enzymes [BR:
eaj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Q3M24_09830
Transfer RNA biogenesis [BR:
eaj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Q3M24_09830
Prokaryotic type
tRNA splicing ligases
Q3M24_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
XCN75009
UniProt:
A0AAU8M1L6
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All DBs
Position
2115877..2117052
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AA seq
391 aa
AA seq
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MKKVISTEKKPIKLWLDDLEVGALEQARHLANLPFAFRHIALMPDAHQGYGMPIGGVLAA
EDVVIPNAVGVDIGCGMCAVRTSVQEISQESLKKIMGDVRKSIPVGFKHHTKAQDETFMP
EGYAEDGFDELKIVRGEYKAALKQVGTLGGGNHFLEIQQGSDGFVWLMLHSGSRNLGYKV
AHHYNKLAIELNRKWHTSVPEKWQLAFLPLDGRKGQDYLREMQYCVDFALANRALMMQRL
QEAFAEAVGEVDFGEIINIAHNYAAMEHHFKRNVMIHRKGATKAYADQLGIIPGSQGTAS
YIVKGKGEPESFMSCSHGAGRRLGRKQAQKELDLAVEKERLDAIGVIHGMRNTKDLDEAP
GAYKDISVVMDNQRDLVEIEVELRPLAVIKG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttattagtacagaaaagaaacccatcaagctttggcttgatgatctggaa
gtcggggctttggagcaggcaaggcatcttgccaatctcccttttgccttccgccacatt
gccctcatgccggatgcgcaccagggctacggaatgcccatcggcggcgttctagctgcg
gaagacgtggttatccccaatgcggtgggggtggatatcggctgcgggatgtgtgcggtc
aggacctctgtccaggagataagccaggagagcttgaagaaaattatgggggatgtccgc
aaaagcataccggtcggcttcaagcatcatactaaggcccaggacgagacctttatgccg
gaaggctatgcagaagacggctttgatgaactgaagattgttcgcggggaatacaaggca
gcactgaagcaggtgggtaccttgggcggaggtaatcatttccttgagatccagcagggg
agtgacggctttgtctggctgatgctccactctggaagccggaatcttggctataaggtg
gcgcatcattataataagttggctatcgagctgaaccgaaaatggcatacttcggtgccg
gaaaaatggcagttggcctttctccctctggatgggcgtaagggccaggattatctccga
gagatgcagtactgcgttgattttgccctggcaaaccgagccctgatgatgcagcggctc
caggaagcctttgctgaggctgtaggggaggttgacttcggggagataatcaatatcgcc
cataattatgcggcgatggaacatcattttaaacgcaatgtgatgattcaccgcaagggc
gcgaccaaggcctatgcagaccagctgggcattatccctgggagccagggaactgcgagc
tatatcgttaagggtaagggagagccggagagttttatgtcctgctcacatggggccggg
cgcaggctggggcgtaagcaggcccagaaggaactggatcttgctgtggaaaaggaacgg
cttgatgccatcggagtgatccacgggatgcgcaatacaaaggatctggatgaagcgccg
ggtgcgtataaggatatctctgtagtgatggataatcagcgagatcttgttgaaatcgag
gtggagttacggcctctggcggtgattaaggggtag
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