Sinorhizobium alkalisoli: EKH55_0019
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Entry
EKH55_0019 CDS
T06241
Name
(GenBank) Integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
eak
Sinorhizobium alkalisoli
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eak03032
]
EKH55_0019
03036 Chromosome and associated proteins [BR:
eak03036
]
EKH55_0019
03400 DNA repair and recombination proteins [BR:
eak03400
]
EKH55_0019
DNA replication proteins [BR:
eak03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EKH55_0019
Chromosome and associated proteins [BR:
eak03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EKH55_0019
DNA repair and recombination proteins [BR:
eak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EKH55_0019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
QFI64893
LinkDB
All DBs
Position
1:16880..17182
Genome browser
AA seq
100 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAAGNRVELRGFGAFSVKNRPSRS
GRNPRTGDAVFVEEKWVPFFKTGKELRERLNPDMNGKDET
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagtcagaactggtgcagattgtggccgcgcgcaatccgcatctctatcaccgc
gacgtcgaaaacatcgtcaatgcggttctcgatgagatcacggatgcacttgccgccggc
aatcgtgtcgagctgcgcggcttcggcgccttctccgtcaagaaccgcccgtcgcgttca
ggccgcaacccgcgcaccggcgatgccgtcttcgtcgaggaaaagtgggtgcccttcttc
aaaaccggcaaggagctacgcgagcggctcaaccccgacatgaacggcaaggacgagact
tga
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integrated database retrieval system
