Sinorhizobium alkalisoli: EKH55_0470
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Entry
EKH55_0470 CDS
T06241
Name
(GenBank) polyamine sensor NspS, involved in biofilm formation
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EKH55_0470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eak02000
]
EKH55_0470
Transporters [BR:
eak02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
EKH55_0470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QFI65344
LinkDB
All DBs
Position
1:complement(475621..476685)
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AA seq
354 aa
AA seq
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MGIERGLRMKGRAAISVLLAALVGASACHAETLNLLIWEDYIDQDLIDRWTQETGVSIHQ
INFDSDDARDVILADPTNHIDLVTVDEHGASLFGKKGVLEPLSDSNLPALADYAPEWRKR
CAGYGLPYLWGTVGILYRADVIEPPPTSWQDMMRPAPALKKHVAMFDDYSELFVPPLVLL
GASINANDTETLKAAFELLKAQAPSVLTYDYVITAIQSPTIGQDIHMALGYSGDQHVLNE
KIGKSGLWRYAVPLEGTLSWLDCVSVTAASPHKQRALEFLRYVGSPEVAAANALSLNMPT
PSSAAQKLLPESVRSNPEIYPPEEVLTRSQYQQELSVNSVQARRRIISTLANFQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgagcgggggctgaggatgaaagggcgtgccgcaatttccgtgttactggca
gcgcttgtcggcgcgtccgcgtgccatgccgagacactgaaccttttgatctgggaagac
tatattgaccaggacctcatcgatcgctggacgcaggagaccggcgtttcgattcaccag
atcaatttcgacagcgacgacgcccgcgacgtgatcctcgccgacccgaccaatcacatc
gacctggtcacggtcgatgagcatggcgcttcgctcttcggcaagaagggtgtcctcgaa
cccctctccgacagcaatctgccggcgctcgcggactatgcgcccgagtggcgcaagcgc
tgcgcaggctatggccttccctatctgtggggcacggtcgggattctctatcgtgccgac
gtcatcgagccgccgcctacgtcctggcaggacatgatgcgtccggcgcccgccctcaag
aagcacgtcgcgatgttcgacgactatagcgaactcttcgtgccgccgctggtactgctc
ggcgcttccatcaatgccaacgacaccgagaccctgaaggccgccttcgaattactgaag
gcccaggcgccgtccgttctgacctacgactatgtcatcaccgccattcagagccccaca
atcggccaagatatccatatggcgctcggctacagcggcgatcagcacgtcctcaacgag
aagatcggcaagtccggtctgtggcgctacgccgttcccttagaaggaacgctctcctgg
ctcgactgcgtttcggttaccgccgcctctccccacaagcaacgggctctggagttcctc
agatatgtcggctcgcccgaggtcgcagccgccaatgcgctgtcgctgaacatgcctacc
ccgagcagtgcagcacagaagctcctgcctgagtccgtacgctccaatccggaaatctac
ccgccggaggaggtgctgacgagaagtcagtaccagcaagaactttcggtcaattccgtc
caggcgcgccggcgcatcatcagcacattggcaaacttccagtga
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