KEGG   Sinorhizobium alkalisoli: EKH55_0470
Entry
EKH55_0470        CDS       T06241                                 
Name
(GenBank) polyamine sensor NspS, involved in biofilm formation
  KO
K11069  spermidine/putrescine transport system substrate-binding protein
Organism
eak  Sinorhizobium alkalisoli
Pathway
eak02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:eak00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    EKH55_0470
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:eak02000]
    EKH55_0470
Transporters [BR:eak02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Spermidine/putrescine transporter
    EKH55_0470
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6 SBP_bac_1
Other DBs
NCBI-ProteinID: QFI65344
LinkDB
Position
1:complement(475621..476685)
AA seq 354 aa
MGIERGLRMKGRAAISVLLAALVGASACHAETLNLLIWEDYIDQDLIDRWTQETGVSIHQ
INFDSDDARDVILADPTNHIDLVTVDEHGASLFGKKGVLEPLSDSNLPALADYAPEWRKR
CAGYGLPYLWGTVGILYRADVIEPPPTSWQDMMRPAPALKKHVAMFDDYSELFVPPLVLL
GASINANDTETLKAAFELLKAQAPSVLTYDYVITAIQSPTIGQDIHMALGYSGDQHVLNE
KIGKSGLWRYAVPLEGTLSWLDCVSVTAASPHKQRALEFLRYVGSPEVAAANALSLNMPT
PSSAAQKLLPESVRSNPEIYPPEEVLTRSQYQQELSVNSVQARRRIISTLANFQ
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgggcatcgagcgggggctgaggatgaaagggcgtgccgcaatttccgtgttactggca
gcgcttgtcggcgcgtccgcgtgccatgccgagacactgaaccttttgatctgggaagac
tatattgaccaggacctcatcgatcgctggacgcaggagaccggcgtttcgattcaccag
atcaatttcgacagcgacgacgcccgcgacgtgatcctcgccgacccgaccaatcacatc
gacctggtcacggtcgatgagcatggcgcttcgctcttcggcaagaagggtgtcctcgaa
cccctctccgacagcaatctgccggcgctcgcggactatgcgcccgagtggcgcaagcgc
tgcgcaggctatggccttccctatctgtggggcacggtcgggattctctatcgtgccgac
gtcatcgagccgccgcctacgtcctggcaggacatgatgcgtccggcgcccgccctcaag
aagcacgtcgcgatgttcgacgactatagcgaactcttcgtgccgccgctggtactgctc
ggcgcttccatcaatgccaacgacaccgagaccctgaaggccgccttcgaattactgaag
gcccaggcgccgtccgttctgacctacgactatgtcatcaccgccattcagagccccaca
atcggccaagatatccatatggcgctcggctacagcggcgatcagcacgtcctcaacgag
aagatcggcaagtccggtctgtggcgctacgccgttcccttagaaggaacgctctcctgg
ctcgactgcgtttcggttaccgccgcctctccccacaagcaacgggctctggagttcctc
agatatgtcggctcgcccgaggtcgcagccgccaatgcgctgtcgctgaacatgcctacc
ccgagcagtgcagcacagaagctcctgcctgagtccgtacgctccaatccggaaatctac
ccgccggaggaggtgctgacgagaagtcagtaccagcaagaactttcggtcaattccgtc
caggcgcgccggcgcatcatcagcacattggcaaacttccagtga

KEGG   Sinorhizobium alkalisoli: EKH55_2230
Entry
EKH55_2230        CDS       T06241                                 
Name
(GenBank) ABC transporter, periplasmic spermidine putrescine-binding protein PotD
  KO
K11069  spermidine/putrescine transport system substrate-binding protein
Organism
eak  Sinorhizobium alkalisoli
Pathway
eak02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:eak00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    EKH55_2230
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:eak02000]
    EKH55_2230
Transporters [BR:eak02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Spermidine/putrescine transporter
    EKH55_2230
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_1 SBP_bac_6 SBP_bac_11
Other DBs
NCBI-ProteinID: QFI67104
LinkDB
Position
1:2217786..2218946
AA seq 386 aa
MTKWYRENAPITAVKLADELMRLKRGSVSRRHFLGVTGLGLAAAVLARQPGLFNSTVFAG
DLGSQMSIATWPNYHDPATFEAFTAATGVAVEVNVFGSNEEMLAKLQAGGTGWDLFVPTN
YTISTYVKLGLIDELDMGQLPNFDASTENARFTHEGMVDGRTYAVPKNWGTTGIAVNTSK
IKAPVSSWKDFFEVAMSEADGRTMVHDYQLTTIGNALVSLGYSFNSIKPEELAKAEELLL
RVKPHLYAINSDYQPAMRATDAWMTMCWTNDGAQLNRDMPEIEYVLGKDGGEIWTDFYAI
PKSAANKPAGYALLNYLMAPENAVKEHIANGAPTTDSRVLKLLPEEVTSNKIVYPDEASL
TPLEFGAAVTLTDPGRAELMARFKSA
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaccaagtggtacagagaaaatgccccaatcactgcagtgaagctcgccgacgaactg
atgcgcctgaagcgcggctcggtctcacggcggcatttcctcggcgtaaccggcctcggc
ctcgccgccgctgtcctggcacgccagcccggcctcttcaattcaaccgttttcgccggc
gatctcggcagccagatgtcgatcgccacctggccgaactatcacgatcccgccaccttc
gaagccttcaccgctgccaccggcgtcgccgtcgaggtcaatgtcttcggttcgaatgaa
gagatgctcgcgaagctgcaggcgggcggcaccggctgggacctgttcgttcccaccaat
tatacgatctcgacctatgtcaagctcggcctgatcgacgaactggacatgggacaattg
ccgaacttcgatgcgtcgaccgagaatgcgcgcttcacccatgagggcatggtcgacggc
aggacctatgcggttcccaagaactggggaacgaccggcattgcggtgaacacgagcaag
atcaaagcgccggtatccagctggaaggacttcttcgaggtggcgatgtcggaggccgac
ggccgcacaatggtgcatgattatcagttgaccaccatcggcaatgcgctcgtctcgctc
ggctactccttcaactcgatcaagccggaggagttggccaaggctgaggaactgttgctc
cgcgtcaagccgcatctctacgcgatcaacagcgactaccagccggcgatgcgcgcgacc
gatgcctggatgaccatgtgctggaccaatgacggcgcccagctcaaccgcgacatgccg
gagatcgagtacgtgctcggcaaggacggcggcgagatctggacggacttctatgccatc
ccgaaaagcgccgccaacaagccggccggctatgcgctgctcaattacctgatggcgccg
gaaaacgcagtcaaggagcacatcgccaacggcgcgccgaccaccgatagccgcgtgctg
aagctgctgccggaggaggtcacctcgaacaagatcgtctatccggacgaggcgtcgctg
acgccgctcgagttcggcgccgccgtgaccttgaccgaccctggtcgcgccgagctgatg
gcccgcttcaagtccgcctga

KEGG   Sinorhizobium alkalisoli: EKH55_4029
Entry
EKH55_4029        CDS       T06241                                 
Name
(GenBank) ABC transporter, periplasmic spermidine putrescine-binding protein PotD
  KO
K11069  spermidine/putrescine transport system substrate-binding protein
Organism
eak  Sinorhizobium alkalisoli
Pathway
eak02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:eak00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    EKH55_4029
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:eak02000]
    EKH55_4029
Transporters [BR:eak02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Spermidine/putrescine transporter
    EKH55_4029
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6 SBP_bac_1 SBP_bac_11 TAT_signal UCR_Fe-S_N DUF7625
Other DBs
NCBI-ProteinID: QFI68903
LinkDB
Position
2:complement(420187..421323)
AA seq 378 aa
MTHKGTSAGRPTRREFLKSATVVGGGLLATPYLGRLAFAAPVELNMLAWYGHAEPDVVAE
FEAENNVKFKPKYYTGGDNMLGLIAQSPPGTFDVILSDAEYVQQLNAAGYIEELDPKDYD
FDDYFPEFQQFAGHWQDGKLYSVLTRFGFLGVAYNTEALTEKEASTYNVYWAEKLKGKVG
HFDWHLPNLGQIGLLEGNASPYDIDETAWGKLQEKVTTLRPQIGGFFDYGGTFSSLQNGQ
MLAMAGIGDWITGTLEKDGAKVRSVIPEEGGLQWTESFSIGKGSTKAELARKWIQYITSA
QGQVKSANMAAYPALIPNQKGWELLAKETPEEAKRQGMMLSESNVMDLIRNGRIKYRQLP
VQQSLEDWNDFWSEYKGS
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgacccacaagggcacttcggcagggcgtccgacgcgacgcgaatttttaaagagtgca
accgttgtcggcggtgggcttttggcaacgccgtatctcggcaggcttgccttcgccgca
ccggtcgagctcaacatgctcgcttggtatggacacgccgagcccgatgttgttgccgaa
ttcgaggctgaaaacaacgtcaagttcaagccgaaatactataccggcggcgacaacatg
ctggggctcatcgcgcagtcacctcccggcaccttcgatgtcatcctttccgacgccgaa
tatgtgcagcagctcaatgctgccggctacatcgaggagctcgatccgaaggattatgac
ttcgacgactatttccccgaattccagcaattcgccggccattggcaggacggcaagctc
tattcggtgctcacccgcttcggctttctgggtgtcgcctataacaccgaggcgctgacc
gaaaaggaagcctctacgtacaacgtctattgggccgagaagctgaagggcaaggttggg
cacttcgactggcacctgcccaatctcggccagatcggcctgctcgaaggcaacgcctcg
ccctacgacatcgatgagacggcctggggcaagctgcaggagaaagtgacgacgctgcgt
ccgcagattggcggcttcttcgactatggcggcaccttctcgtcgctgcagaacggtcag
atgctggccatggccggcatcggcgactggatcaccggtacgctggagaaggacggcgcc
aaggtacgcagcgtcatccccgaagagggtggcctgcagtggaccgaatccttctcgatc
ggcaagggctcgaccaaagcggagctcgccagaaaatggatccagtacatcacctcggct
caaggccaggtgaagtctgcgaacatggcggcctatccggcgctaatcccaaaccagaag
gggtgggaattgttggcgaaggaaacgccggaggaagccaagcgtcagggtatgatgctc
agtgagagcaacgtcatggacctgatccgcaacggccgcatcaagtaccggcagttaccg
gttcagcagagcctcgaggattggaacgacttctggtcggaatacaagggctcttga

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