Sinorhizobium alkalisoli: EKH55_1047
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Entry
EKH55_1047 CDS
T06241
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak03030
DNA replication
eak03430
Mismatch repair
eak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKH55_1047
03430 Mismatch repair
EKH55_1047
03440 Homologous recombination
EKH55_1047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eak03032
]
EKH55_1047
03400 DNA repair and recombination proteins [BR:
eak03400
]
EKH55_1047
Enzymes [BR:
eak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKH55_1047
DNA replication proteins [BR:
eak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EKH55_1047
DNA repair and recombination proteins [BR:
eak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EKH55_1047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QFI65921
LinkDB
All DBs
Position
1:1024249..1027743
Genome browser
AA seq
1164 aa
AA seq
DB search
MVNGEGTGQDITGAKNPQFVHLRVHSAYSLLEGALPLKKIIGKAVGDDQPAIGIADTNNL
FAALEFSQKAADDGLQPIIGCQLSIDMEDEDGERRGHPHQLAKLPTIVLIAATDAGYARL
VDLVSRAYLEGEGHQAARITRSWLAEGGTEGLIALTGAAGGPVDLALKAGSQPLAEARLK
VLLALFGDRLYVEVQRQGNYDRRHESRMVELAYCHDVPLVATNEAFFPSPADYDAHDALM
AVAHNAVVSDDSRFRLTPDHYLKSRKEMATLFADLPEALEHTVEIARRCSFMLNTRKPIL
PRFTGGSDDPEEAERAEAAELRRQAEEGLDFRLAKLGMAPGYREEDYRERLAFELSVIER
MKFPGYFLIVADFIKWAKEHDIPVGPGRGSGAGSLVAYALTITDVDPMRFSLLFERFLNP
ERVSMPDFDIDFCQDRREEVIRYVQRKYGREQVAQIITFGSLQARAALRDVGRVLEMPYG
QVDKICKLVPNNPANPTPLSKAIEEEPRLQEEAEKEPVVARLLDIAQKIEGLYRHASTHA
AGIVIGDRPLSQLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVDFV
AKRGIEVDLASIPIDDPKTYEILSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVAL
YRPGPMENIPVYNARKHGEEEIESIHPKIDYLLKETQGVIVYQEQVMQIAQVLSGYSLGE
ADLLRRAMGKKIKEEMDKQRARFVEGAVQNGVSKPQADLIFDLLAKFANYGFNKSHAAAY
AIVSYQTAYMKAHYPVEFLAASMTLDMSNTEKINDFRQDAKRLGIEVISPSVQTSFRHFE
TGDNRIYYALAAIKGVGESAVDHIVEVRGDRPFASLEDFCLRIDPKLLNRRVFESLIAAG
AFDCFGHDRAELIGGLDRILGFAQRAQENKVSGQSDMFGAGAATGPEKIVLPPYTPWLAS
EKLHREFQVLGFYLSAHPLDTYAKLLQKMRVQAFGDFAAAVKKGATAGRLAGTVTSKQER
KTRTGNKMGIVAFSDASGQFEAVLFSETLHQNRDLLEPGKSMVMTVDADERPEGIGLRIR
TLRSLEEESLQMQKALRVYVRDSGPLRSIAPHLNTKGDGLVSFILIKDDGQREIEVELGE
KYRISPEIAAALRSAPGVVDVELV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatggcgaaggcactgggcaggacatcacgggcgcaaagaacccccaattcgtc
catctgcgtgtgcactccgcttattcgctgctcgagggggcgctgccgctcaagaagatt
atcggcaaggcggttggcgatgaccagccggcaatcggaatagccgacaccaacaacctg
tttgcggcgctggaattctcgcagaaggcggcagacgacggattacagccgatcatcggc
tgccagctctccatcgatatggaggacgaggatggcgagcggcgggggcatccacatcaa
ctcgcgaagctgcctacaatcgtccttatcgccgcaaccgacgccggctacgcgcggctc
gtcgatctcgtcagccgcgcctatctcgaaggcgaagggcatcaggcggcgcggatcacg
cgttcatggcttgcggagggtggaacggaagggctgatcgccttgacgggtgctgccggt
ggtcccgtcgatctggcgctcaaggccggctcgcagccgcttgcggaggcacggctgaaa
gtgcttctcgcgcttttcggcgatcgcctctatgtcgaggtgcaacggcagggcaattac
gatcggcgtcacgagagccgcatggtggagcttgcctattgccacgacgttccgcttgtc
gcgaccaatgaggccttctttccttcacccgccgactacgacgcccatgatgccctgatg
gcggtcgcccataatgccgtcgtctcggatgacagccgtttccggctgacgccggatcat
tatctgaaaagccgcaaggaaatggcgacgctcttcgccgatctaccggaggcgctggaa
catacggtcgagatcgcgcgacgctgttcattcatgctcaatacacgcaaaccgattctg
ccgcgctttaccggcggctcggacgatccggaggaagccgaacgcgcggaagcggcggag
ttgcgccggcaggcggaggaggggctggatttccgtttggccaagctcggtatggcgccc
ggctatagggaagaggattaccgcgagcggctggccttcgagctcagcgtcatcgagcgc
atgaagtttccgggctacttcctgatcgttgcggacttcatcaaatgggccaaggagcat
gacattccggttggccccggccgtggctccggcgccggctcgctggtcgcctatgcgctg
acgattaccgatgtcgatccgatgcgcttttcgttgctgttcgaacgcttcctcaatccc
gagcgcgtgtcgatgccggacttcgacatcgacttttgccaggaccggcgcgaagaggtc
atccgctacgtccagcgcaaatatggacgcgagcaggtggcacagatcatcacattcggt
tcgctgcaggcgcgagcggcgctgcgtgacgtcgggcgggtgctggaaatgccttacggg
caggtcgacaagatctgcaagctcgtaccgaacaaccccgccaatccgacgccgctttcg
aaggcgatcgaggaggagccgcgcctgcaggaggaggcggagaaggagccggtcgtcgcc
cgccttctcgacatcgcgcaaaagatcgagggtctctatcgtcacgcctcgacccatgcg
gccggtatcgttatcggcgatcggccgctgtcgcagctcgtgccgatgtaccgcgatccg
cgttcggacatgccggtcactcagttcaacatgaaatgggttgagcaggccggtctcgta
aaattcgactttctcgggctcaagacgctgacggtgctgaagacagccgtcgacttcgtc
gccaagcgcggcatcgaggttgatcttgcgagcatcccgatcgacgatccgaagacttac
gaaattctctcccgcggcgaaacggtcggcgtctttcaggtggaaagcgccggcatgcgc
aaggcgctgatcggcatgcgcccggactgcatcgaggacatcattgcactcgtcgcgctc
taccgccccgggccgatggagaacatcccggtctacaatgcccgcaagcatggcgaggag
gagatcgaatcgattcatccgaagatcgattacctgctcaaggaaacccagggcgttatc
gtctatcaggagcaggtgatgcagatcgcccaggtgctttcgggctattcgctcggcgag
gcggacctgctgcgccgcgccatgggcaagaagatcaaggaggagatggacaagcagcgc
gcccgcttcgtcgaaggcgccgttcagaacggcgtctccaaaccgcaggcggatctgatc
ttcgacctgcttgcgaagttcgccaattacggcttcaacaagtcgcatgcggccgcctat
gccatcgtctcctaccagaccgcctatatgaaggcgcattatccggtcgaattcctggca
gcgtccatgacgctcgacatgtcgaacacggagaagatcaacgatttccgccaggacgca
aaacgcctcggtatcgaggtgatctcgccctcggtgcagacgtcgttccgccatttcgag
accggcgacaaccgcatctattatgcgctggcggcgatcaagggtgtcggcgagtcggcg
gtcgaccatatcgtggaggttcgtggcgaccggcccttcgcaagcctcgaggacttctgc
ctcaggatcgatccgaagcttttgaaccggcgcgtcttcgagagcctgatcgccgccggt
gcctttgactgcttcggtcatgatcgggccgagctcatcggcgggctcgaccgcatcctc
ggctttgcgcagcgcgcccaggaaaacaaggtgagcgggcagagcgacatgttcggcgca
ggcgctgcgacgggccccgaaaagatcgtgctgccgccctacacgccctggctcgcctcg
gagaagctgcaccgcgaattccaggtgctcggcttctatctctcggcgcacccgctcgat
acctacgcaaagctgctccagaagatgcgggtgcaggcattcggcgatttcgccgcggcg
gtaaaaaagggcgccaccgccggccggctcgccgggacggtcacatcgaaacaggaacgc
aagacgcgcaccggcaacaagatgggcattgttgccttttccgacgcctccggccagttc
gaggcggttctcttttcggagacgctgcaccagaaccgcgatttgctggaaccgggcaaa
tcgatggtgatgacggtggatgccgacgagcgcccggaaggcatcggtcttcgcataaga
acgctccgttcgctagaggaggaatcgctgcagatgcaaaaggcgctgcgcgtctatgtg
cgcgattccggccccttgcgctcgattgcaccccacctcaacacgaagggcgacggcctg
gtttccttcatcctcatcaaggacgacggccagcgggaaatcgaggtcgaacttggcgag
aaataccggatatcgccggaaatcgccgcggcgctgcgctcggcacccggcgttgttgac
gtcgaactggtttga
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