Sinorhizobium alkalisoli: EKH55_1492
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Entry
EKH55_1492 CDS
T06241
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EKH55_1492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eak03400
]
EKH55_1492
DNA repair and recombination proteins [BR:
eak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKH55_1492
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EKH55_1492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
DnaJ_CXXCXGXG
BCA_ABC_TP_C
AAA_16
nSTAND1
AAA_25
AAA_33
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QFI66366
LinkDB
All DBs
Position
1:1460103..1463024
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGIDLDLPRNRLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGV
PYSPATGLPIESQTVSQMVDRVLEFGEGTRLYILAPLVRGRKGEYRKELAELMKKGFQRV
KVDGQFYEIADVPALDKKFKHDIDVVVDRVVVRPDLATRLADSIETCLTLADGLAVAEFA
DRPLPPDETAAGGAANKSLNETHERVLFSEKFACPVSGFTIPEVEPRLFSFNNPFGACTT
CDGLGSQQKIDEALVVPEPNRTLRDGAIAPWAKSTSPYYNQTLEALGQVFDFKLGNRWSE
LSAEAQKAILHGTEEKITFHYKDGARAYNTTKTFEGVVPNLERRWKETDSAWAREEIERY
MSAAPCPACAGYRLKPEALAVKINRLHIGEVTEMSIRAARDWFEALPHELSVKQNEIAVR
ILKEIRERLRFLNDVGLEYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLRHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGEIVAEGTPS
EIMANSGSLTGRYLSGELSVAVPGERRKPKKKKEITVVGARANNLKNVTASIPLGVFTAV
TGVSGGGKSTFLVETLYKAAARRIMGARENPADHDRIDGFEHIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVHFKGKSIADVLDMTVEEGVEFFQAVPAVRDKLVTLNQVGLG
YIKIGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVAKLLEVLHELV
NQGNSVVVIEHNLEVIKTADWIIDFGPEGGDGGGEVIAKGTPEDVVKEPRSYTGQFLKEL
LERRPTKKAVAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactcaagaccatttccattcgcggcgcgcgcgagcacaacctcaagggaatc
gacctcgacctgccgcgcaacaggctgatcgtgatgacggggctttccgggtccggcaaa
tcctcgctcgccttcgacacgatctatgcggagggccagcgccgctacgtcgaaagcctg
tccgcctatgcccggcagttcctggagatgatgcagaagccggacgtcgaccagatagac
ggtctctcccccgcgatctcgatcgagcagaagacgacctcgcgcaacccgcgctcgacg
gtcggtacggtcaccgagatctacgactatctgcgcctgctcttcgcgcgcgtcggcgtg
ccgtattcgccggcaacggggttgccgatcgagagccagacggtcagccagatggtcgac
cgcgtgctggagttcggagaaggcacccgtctctatattctggcgccgctcgtgcgtggc
cgcaaaggcgagtacaggaaggaactcgccgaattgatgaagaagggcttccagcgcgtc
aaggtggacgggcagttctacgagatcgccgacgtcccggcgctcgacaagaaattcaag
cacgatatcgacgtcgtcgtcgaccgcgtcgtcgtcaggccggatctcgccacgcgcctc
gccgacagcatcgagacctgcctgacgcttgccgacggcttggctgtcgccgagttcgcc
gaccgaccactgccgccggacgaaaccgcggccggcggcgcggccaacaagtcgctcaac
gagacgcatgagcgcgtgctgttttcggaaaaattcgcctgcccggtgtccggcttcacc
attccggaggtcgagccgcggcttttctcgttcaacaatcccttcggcgcctgcacgacc
tgcgacggtcttggcagccagcagaagatcgacgaggcgctggtcgttccggaaccgaac
aggacactgcgcgacggcgcgatcgcgccctgggccaagtcgacctcgccctattacaac
cagacgctcgaagcgctcggccaggtcttcgatttcaagctcggcaaccgctggagcgag
ctttcggctgaagcgcagaaggcgatcctccatggcaccgaagaaaagatcaccttccac
tacaaggacggtgcgcgcgcctacaacaccaccaagaccttcgagggcgtcgtgcccaat
ctcgagcggcgctggaaggagaccgacagcgcctgggcgcgggaagaaatcgagcgctat
atgtcggccgcgccctgccccgcctgtgccggctaccggctgaagccggaagcgctggcg
gtcaagatcaaccggcttcacatcggcgaagtcacggaaatgtcgatccgggctgcccgc
gactggttcgaggcgctgccgcatgagctcagcgtcaagcagaacgagattgccgtgcgg
atcctcaaggagatccgcgagcggttgcgcttcctgaacgatgtcggactggaatatctg
agcctgtcgcgcaattccggcacgctctccggcggcgaaagccagcgcatccgccttgcc
tcccagatcggctccggcctgaccggcgtgctttatgtgctggacgagccgtcgatcggt
ctgcatcagcgcgacaatgcgcgcctgctcgacacgctgaggcacctgcgcgacatcggc
aacaccgtcatcgtcgtcgagcatgacgaggacgcgatcctgaccgcggactatgtcgtc
gacatcggcccggcggcgggcatccatggcggcgagatcgtggccgaaggcacgccctcc
gagatcatggccaattccgggtcgctgaccggcagatatctctcgggcgagctttccgtc
gccgtgccaggcgaaaggcgcaagcctaaaaagaagaaggaaatcactgtcgtaggagcg
cgtgctaacaatctgaagaatgttaccgcgtcgatcccgcttggcgtcttcacggcggtg
accggcgtctcgggcggcggcaagtccaccttcctggtcgaaacgctctacaaggcggcc
gcccgccgtatcatgggcgcgcgcgagaacccggccgatcacgaccgcatcgacggtttc
gagcatatcgacaaggtgatcgacatcgaccagtcgccgatcggccgcacgccgcgctcg
aatccggcgacctataccggcgccttcacgccgattcgcgactggtttgccggcctgccg
gaggcgaaggcgcgcggctaccagccgggccgcttttccttcaacgtcaagggcggccgc
tgcgaggcctgccagggcgatggcgtcatcaagatcgagatgcacttcctgccggacgtc
tacgtcacttgcgacgtctgccacggcaagcgctacaatcgcgaaacgctcgacgtgcac
ttcaagggcaagtcgattgccgacgtcctcgacatgacggtcgaggaaggcgtcgagttc
ttccaggccgtgccggcggtgcgcgacaagctggtgacgctgaaccaggtggggctcggc
tatatcaagatcggccagcaggctaacacgctttcgggcggcgaggcccagcgcgtgaag
cttgccaaggaactgtcgaagcgctccaccgggcgcacgctttacatactcgatgagccg
acaaccggcttgcatttccatgacgtagccaagcttcttgaagttctgcatgagctcgtc
aaccagggcaattctgtcgtcgtcatcgagcacaacctcgaagtgatcaagacggcggac
tggatcatcgacttcggtcccgaaggcggcgacggagggggcgaggtcattgccaagggc
acgccggaagacgtcgtgaaggaaccccgctcctatacggggcagttcctgaaggagctt
ctggagcgccgcccgacgaagaaggccgtcgcggcggagtga
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integrated database retrieval system
