Sinorhizobium alkalisoli: EKH55_1680
Help
Entry
EKH55_1680 CDS
T06241
Name
(GenBank) Transcriptional activator protein LuxR
KO
K19733
LuxR family transcriptional regulator, quorum-sensing system regulator SinR
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKH55_1680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eak03000
]
EKH55_1680
Transcription factors [BR:
eak03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
EKH55_1680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Autoind_bind
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_28
HTH_10
DUF134
Motif
Other DBs
NCBI-ProteinID:
QFI66554
LinkDB
All DBs
Position
1:1660966..1661703
Genome browser
AA seq
245 aa
AA seq
DB search
MTDEQAVLDLLDVVEYGGCAEPQQFFALMRRTFNIAHLLYLEAEPSADGLKVCRLHHTFG
TYAADLYHSRGLHRIDPILRLALGGVRPVEWASARRRFPECEPLFEAAEEIGLSTEGVAL
PLPSPASRMALLAISSNLSPAEWSDYRRRHLRDFQLAANLFHASMLEHSAMPGAMDERDM
RLTLRETEVLTWSAAGKSYWEIATILGISERTVRFFMTNARRKLNVVSNTQAVAQAVRHA
LIPTI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgaacaagctgtcctcgatctgctggatgtcgtcgaatacggaggctgcgcc
gaaccgcagcaattctttgccttgatgcgccgcaccttcaatatcgcgcatctcctctac
ctcgaagcggaaccatcggcagatggcctgaaagtctgccgcctgcatcacactttcggc
acctatgctgccgatctctatcattcgagagggctccaccggatcgacccgattctgaga
cttgcgctcggcggcgtcaggcccgtcgaatgggcgagcgcccgccgacgcttccccgaa
tgcgaaccgctcttcgaggcggcagaggagatcggtctctcgacggagggcgtggcgctg
ccgcttccgtctccagccagtcgtatggcgcttctcgctatcagttccaatctttcgccg
gcggaatggtccgactatcgccgccgccatctgcgtgatttccaactggccgcaaatctg
ttccacgcctccatgctcgagcattcggcgatgcccggggccatggacgagcgcgacatg
agactgaccttgcgtgaaaccgaggtcctcacctggtcggcagccggcaagagctattgg
gaaatcgccaccatcctcggcatctccgagcgcacggtccgtttcttcatgaccaacgcc
cgacgcaagctcaacgtagtgtcgaacacgcaggccgttgcgcaagccgttcgccatgcc
ttgatccccaccatctga
DBGET
integrated database retrieval system
