Sinorhizobium alkalisoli: EKH55_2140
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Entry
EKH55_2140 CDS
T06241
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak03420
Nucleotide excision repair
eak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EKH55_2140
03430 Mismatch repair
EKH55_2140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eak03400
]
EKH55_2140
Enzymes [BR:
eak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKH55_2140
DNA repair and recombination proteins [BR:
eak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKH55_2140
MMR (mismatch excision repair)
Other MMR factors
EKH55_2140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QFI67014
LinkDB
All DBs
Position
1:2121074..2123653
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AA seq
859 aa
AA seq
DB search
MGRMSKGFDDIPFFDEEPAPRKPASATGGIAARAMAARDRSKRPDYLSGLNPEQADAVET
LEGPVLVLAGAGTGKTRVLTTRIAHILSTGRAYPSQILAVTFTNKAAREMKERIGVLVGH
AVEGMPWLGTFHSIGVKLLRRHAELVGLRSDFTILDTDDVVRLIKQLIQAEGLDDKRWPA
KQFAGMIDGWKNKGLDPSHIPEGDARAFANGKGRELYAAYQNRLLTLNACDFGDLLLHPI
RMFRANPDVLKEYHDRFRYILVDEYQDTNTAQYMWLRLLAQRPRSSERSGTGNPGGARQG
QAAVAPDGAPLRSEPRSGDSVSANKPIQQINLCCVGDDDQSIYGWRGAEVDNILRFEKDF
PGAKVIKLERNYRSTEHILGAASHLIAHNEGRLGKTLFTERSHPDDEKVHVHAAWDSEEE
ARAVGEEIEQLQRGKHNLNDMAILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIR
DAMAYFRLVCQPADDLAFERIINTPKRGLGETTVRTLHDYARSRDIPMLAAASEIIETDE
LKPKARKALFDVVTDFRRWQTLLETTLHTELAEKILDESGYTAMWQADKSAEAPGRLENL
KELIRSMEAFESMRGFLEHVALVMDAEQNEDMDAVSIMTLHSAKGLEFDTVFLPGWEEGL
FPHQRALDEGGRAGLEEERRLAYVGITRAKRRCHIWFVSNRRIHGLWQSTMPSRFLDELP
IDHVEVAEQEASYGGYGRGGYGQSRFDKADPFENSYQTPGWKRAQQHRSDATRDNWGTRS
GHAVERIGYGESGPRTRTIEGELVAKSTTAEPSRFQVGDRVFHLKFGNGNIAAVEGNKLT
IDFDRAGQKRVLDGFVERV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
ttgggccgcatgagcaaaggtttcgacgacatccccttcttcgacgaggagccggcaccg
cgcaaacccgcctccgccacgggcgggatcgcggcgcgtgccatggcggcccgcgacagg
tccaagcgtccggattatctttccggtctcaatccggagcaggcggacgccgtcgaaacc
ctcgaggggcccgtattggtgctcgcgggtgccggcaccggcaagacgcgcgtgctgacg
acccgcattgcccatatcctctccaccggccgcgcctacccatcgcagatcctcgccgtc
accttcaccaacaaggccgcgcgcgagatgaaggagaggatcggcgtgctcgtcggccat
gcggtcgagggcatgccctggctcggcaccttccactcgatcggcgtcaagctcctgcgc
cgccatgccgaactggtgggcttgagatccgatttcaccattcttgacaccgacgacgtg
gtgcgcctcatcaagcagctgatccaggcggaaggcctcgacgacaagcgctggccggcc
aagcagttcgcgggcatgatcgacggctggaagaacaagggcctcgacccttcgcatatc
cccgagggcgacgcccgcgcctttgccaacggcaagggccgcgagctctacgccgcctac
cagaaccggcttctgacgctgaacgcttgcgacttcggcgacctgctgctgcatccgatc
cggatgttccgcgccaatccggatgtgctcaaggagtatcacgacaggttccgctacatc
ctcgtcgacgagtaccaggacaccaatacggcgcagtacatgtggctcaggctcctggcg
cagcggccccggtcttccgagcgatctggcaccggaaatccgggcggagcccggcaaggc
caagcggccgtcgcgcctgatggcgcgcccctgcggagcgagccgcgcagcggcgacagc
gtgagcgcgaataaacccatacaacaaatcaatctctgctgcgtcggcgacgacgatcag
tcgatctatggctggcgcggggcggaggtcgacaacatcctgcgcttcgaaaaggacttt
cccggcgccaaggtcatcaagctggagcgcaattaccgctcgaccgagcacattctcggc
gccgcgtcgcatctgatagcccacaatgaaggccgcctgggcaagacgctattcaccgag
cgcagccatccggacgacgagaaggtgcatgtgcacgccgcctgggactccgaggaagag
gcccgcgcggtcggcgaggagatcgagcagctccagcggggcaagcacaatctgaacgac
atggcgatcctggtgcgcgcctcgttccagatgcgcgagttcgaagaccgcttcgtcacc
ctcggcctcaactatcgcgtcatcggcggcccgcgcttctatgagcggctcgagattcgc
gatgccatggcctatttccgcctggtctgccagccggccgacgacctcgccttcgaacgc
atcatcaacacgccgaagcgtgggcttggcgaaaccaccgtgcgcacgctgcacgactat
gcgcgcagccgcgacattccgatgctcgccgccgcaagcgagatcatcgagacggacgaa
ctgaagccgaaggcgcgcaaggccctcttcgacgtcgtcaccgatttccgccgctggcag
acgctgctcgagacgaccctgcatacggagcttgccgagaaaatcctcgacgagagcggc
tatacggcgatgtggcaggcggacaagtcggccgaagctcccgggcgcctcgaaaacctg
aaggaactcatccgctcgatggaggcgttcgaatcgatgcgcggctttctggagcatgtc
gcgctggtgatggatgccgagcagaacgaggacatggatgccgtctcgatcatgacgctg
cattcggccaagggcctggaattcgacacggtattcctgccgggttgggaggaagggctc
tttccgcaccagcgcgcgctcgacgagggcggccgcgccggcctcgaggaggaacgccgc
ctcgcctatgtcggcatcacccgcgccaagcgccgctgccatatctggttcgtctcgaac
cgccgcatccatgggctctggcaatccaccatgccgtcgcgcttcctcgacgaactgccg
atcgaccatgtggaagtggccgagcaggaagcttcctatggtggctatggccgcggtggc
tacggccagtcgcgcttcgacaaggccgatcccttcgagaacagctaccagacacccggc
tggaagcgcgcccagcagcaccgctcggatgccacccgcgacaattggggcacccgctcc
ggccacgccgtcgagcgcatcggctacggcgaatccggaccgcgcacccgcaccatcgag
ggcgagctcgtcgccaagtcgacgactgcggaaccctcccgcttccaggtcggcgaccgc
gtcttccacctgaaattcggcaacggcaacatcgccgccgtcgaaggcaacaagctgacg
atcgacttcgaccgggcgggacagaaacgggtactggacggatttgtggaaagggtgtga
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