Sinorhizobium alkalisoli: EKH55_2324
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Entry
EKH55_2324 CDS
T06241
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKH55_2324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eak03019
]
EKH55_2324
03110 Chaperones and folding catalysts [BR:
eak03110
]
EKH55_2324
03029 Mitochondrial biogenesis [BR:
eak03029
]
EKH55_2324
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eak04147
]
EKH55_2324
Enzymes [BR:
eak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EKH55_2324
Messenger RNA biogenesis [BR:
eak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EKH55_2324
Chaperones and folding catalysts [BR:
eak03110
]
Heat shock proteins
HSP60 / Chaperonin
EKH55_2324
Mitochondrial biogenesis [BR:
eak03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EKH55_2324
Exosome [BR:
eak04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EKH55_2324
Exosomal proteins of other body fluids (saliva and urine)
EKH55_2324
Exosomal proteins of breast cancer cells
EKH55_2324
Exosomal proteins of colorectal cancer cells
EKH55_2324
Exosomal proteins of bladder cancer cells
EKH55_2324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
QFI67198
LinkDB
All DBs
Position
1:2316684..2318318
Genome browser
AA seq
544 aa
AA seq
DB search
MSAKEIKFSTDARDRMLRGVELLNNAVKVTLGPKGRNVVIDKAYGAPRITKDGVAVAKEI
ELPDKFENMGAQMVREVASKTNDLAGDGTTTATVLAASILREGAKLVAAGMNPMDLKRGI
DLGVAVVVKEIRARAKEVKSSGEIAQVGTIAANGDATVGEMIAKAMDKVGNEGAITVEEA
KTAETALDVVEGMQFDRGYLSPYFVTNAEKMRVELEDPYILIHEKKLGNLQAMLPILEAV
VQSGKPLLILSEDVEGEVLATLVVNKLRGGLKVAAVKAPGFGDRRRAILEDIAVLTAGQM
ISEDLGIKLENVILDMLGHAKRVLIEKDTTTIVDGSGDKATIQARIQQIKAQIEETTSDY
DKEKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRIDDALNATRAAAEEGIVPGGGVALL
RARSVLVGLTGANADVTAGISIVLRALETPIRQIAENAGVEGSIVVGKLTDSRDYNRGFD
AQTETYVDMIKAGIVDPAKVVRTALQDAGSIAALLITAEAMIADIPSRESARPAGNGGMG
GMGY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaggaaatcaaattctccactgatgcgcgcgatcgcatgctgcgcggtgtc
gagttgctcaacaacgccgtgaaggtgacgctgggtcccaagggccgcaatgtggtcatc
gacaaggcctatggcgcgccgcgcattaccaaggacggcgtcgccgttgccaaggaaatc
gaactgcccgacaagttcgagaacatgggcgcgcagatggtgcgtgaggtggcctctaag
acaaacgacctcgccggtgacggcaccacgacggcgactgtgctcgctgcctccatcctg
cgcgaaggcgccaagctcgtcgccgccggcatgaaccccatggatctcaagcgtggcatc
gaccttggtgtcgctgtcgtcgtcaaggaaatccgggcgcgcgccaaggaggtcaagtcc
tcgggcgagattgcccaagtcggcaccatcgccgccaacggcgacgcgacagtcggcgag
atgatcgccaaggcgatggacaaggtcggcaatgaaggcgccatcaccgtcgaggaagcc
aagactgccgagaccgcactcgacgttgtcgagggcatgcaattcgaccgcggctatctc
tcgccctatttcgtcaccaatgccgagaagatgcgcgtggaattggaggacccctacatc
ctcatccacgaaaagaagcttggcaatttgcaagcgatgctgccgatactcgaggcggtc
gtgcagagcggcaaaccgttgctgatcctctccgaggatgtcgagggcgaagttctggcg
acgctggtcgtaaacaagttgcgcggtggcctaaaggtcgcagccgtaaaggcgccgggc
ttcggcgaccgccgcagggccatactggaagacattgccgtcctcacggccggccagatg
atctccgaggatctcggcatcaagctcgagaacgtcatactcgacatgctcggccacgcc
aagcgcgtgctgatcgagaaggataccaccacgatcgtcgacggttccggcgataaagcg
accatccaggcgcgcatccagcagatcaaggcacagatcgaggagacgacctccgactat
gataaggaaaaactgcaggaacgcctggcgaaactcgccggcggcgtcgcggtaatccgc
gtcggcggcgcgacggaaatcgaggtcaaggaaaagaaggaccgcatcgacgatgcgctg
aacgccacgcgtgccgcggctgaggaaggcattgttcctggcggtggtgttgccctgttg
cgcgccaggtcggtcctggtcggattgaccggagcgaatgcggacgtcacggccggcatc
tcgattgtgctcagggcgcttgaaaccccgatccggcagatcgccgagaacgccggtgtc
gaaggctcgatcgtcgtgggaaaactcaccgacagcagggattacaaccggggctttgac
gcgcagacggagacctatgtcgatatgatcaaagccggcatcgtcgacccggctaaggtc
gtgcgcaccgctttgcaggacgccggctcaatcgcggcacttctgatcactgccgaagcg
atgatcgccgacattccctcaagagaatctgcccggccggccggtaacggcggcatgggc
gggatgggatattga
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