Sinorhizobium alkalisoli: EKH55_2878
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Entry
EKH55_2878 CDS
T06241
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKH55_2878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eak03400
]
EKH55_2878
Enzymes [BR:
eak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EKH55_2878
DNA repair and recombination proteins [BR:
eak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EKH55_2878
Prokaryotic type
EKH55_2878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QFI67752
LinkDB
All DBs
Position
1:complement(2891230..2891937)
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AA seq
235 aa
AA seq
DB search
MDATIKLEESWKAALAPEFRHGYMADLKRFLIEQRHQGRQIFPKGSEYFRALDLTPLGRV
RVVILGQDPYHGEGQAHGLCFSVLPGVRIPPSLVNIYKELEVDLGIPPARHGFLESWARQ
GVLLLNAVLTVERGRAASHQGRGWERFTDAVIRIINDQQQPVVFMLWGSYAQKKAAFVDR
SRHLVLTAPHPSPLSAHSGFFGCRHFSKANAFLTAKALDPIDWRLPDNPPLRADP
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgacgatcaagctggaagaaagctggaaggcggccttggcgccggagttccgg
catggctatatggccgatctcaagcgcttcctcattgagcagaggcaccaaggccgacag
atattcccgaagggcagcgagtatttccgggcgctcgacctgacaccgctcggccgggtg
cgggtggtcatcctcggtcaggacccctaccacggcgagggccaggcgcatgggctctgc
ttcagcgtcctacccggcgtgcgcatcccgccatcgctcgtcaatatctataaggaactc
gaggtcgacctcggtattccgccggcgcggcacggcttcctcgaaagctgggcgcgccag
ggcgtgctcctcctgaacgcggtgctgacggtcgaacgcggccgggcggcttcgcatcag
ggccggggctgggagcgcttcaccgacgcggtcattcgcatcatcaatgaccagcaacag
cccgtcgtcttcatgctctggggttcctatgctcagaagaaggcagccttcgtcgatcgc
tcccgccacctcgtcctgacggcgccgcatccctcgccgctctcggcgcattccggcttc
ttcggctgccggcatttctcgaaggccaatgcctttctgaccgcgaaggcactcgatccg
atcgattggcggctgccggacaatccgcccctcagagctgatccgtaa
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