KEGG   Sinorhizobium alkalisoli: EKH55_3266
Entry
EKH55_3266        CDS       T06241                                 
Name
(GenBank) Transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
eak  Sinorhizobium alkalisoli
Pathway
eak03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EKH55_3266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eak03021]
    EKH55_3266
   03019 Messenger RNA biogenesis [BR:eak03019]
    EKH55_3266
Transcription machinery [BR:eak03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     EKH55_3266
Messenger RNA biogenesis [BR:eak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EKH55_3266
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 S1CSD-TOTE-2 NACHT DUF6360 AAA Fungal_virus_P2_C
Other DBs
NCBI-ProteinID: QFI68140
LinkDB
Position
1:complement(3332301..3333566)
AA seq 421 aa
MAEMKLQELKNKTPTDLLAFAEELEVENASTMRKQELMFAILKMLATQDIEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSARVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAT
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRHELQKIFVLRRILAPMGTTDAIEFLIDKLKQTKNNGDFFDSMN
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagctacaagaactcaagaacaagacgccgaccgatctccttgccttt
gccgaagaactcgaggtggaaaacgccagcaccatgcgcaagcaggaactgatgtttgcg
atcctcaaaatgctggcgacgcaggacatcgagatcatcggagaaggcgtcgtggaagtc
cttcaggacggattcggcttcctgcgatcggcgaacgcaaactaccttccgggtccggac
gacatctacatctccccctcgcagatccgccgtttttcgctgaagaccggcgacacggtg
gaagggccgatccgcgggccgaaggaaggcgagcgttactttgcgcttctcaaggtcaac
acgatcaatttcgacgatccggagaagatccgccacaaggttcatttcgacaacctgacg
ccgctttacccgaacgagcggttcaagatggagcttgaggtcccgacctcgaaggatctt
tcggcccgcgtcatcgatctggtggcgccgctcggcaaggggcagcgcgggctgattgtg
gcgccgccgcgtaccggtaagacggtgctcttgcagaatatcgcccattcgatcaccgcc
aaccacccggaatgctatttgatcgtgttgctgatcgacgagcgaccggaagaagtcacg
gacatgcagcgctcggtcaagggcgaagtggtgtcctcgaccttcgatgagccggcgacg
cgtcacgtgcaggtcgccgaaatggtcatcgagaaggccaagcgcctcgtcgagcacggt
cgcgacgtcgtcatccttctcgattcgatcacccgcctcggccgggcctacaacacggtc
gtgccctcttccggcaaggttctgaccggcggcgtcgacgccaatgccttgcagcggccg
aagcgcttcttcggcgcagcccgcaacatcgaggaaggcggttctctcaccatcatcgcc
accgcgctgatcgatacaggcagccgcatggacgaggtcatcttcgaggagttcaagggt
accggcaactccgaaatcgtgctcgaccggaaggtcgccgacaagcgcatcttcccggcg
atggatatcctcaagtcggggacgcgcaaggaagacctgctggtgccgcggcacgaactg
cagaagatcttcgtgctacgccggattctcgccccgatggggacgacggatgcgatcgag
ttcctcatcgacaaactcaagcagacgaagaacaacggggatttcttcgactcgatgaac
gcttga

DBGET integrated database retrieval system