Sinorhizobium alkalisoli: EKH55_3346
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Entry
EKH55_3346 CDS
T06241
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak03030
DNA replication
eak03430
Mismatch repair
eak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKH55_3346
03430 Mismatch repair
EKH55_3346
03440 Homologous recombination
EKH55_3346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eak03032
]
EKH55_3346
03400 DNA repair and recombination proteins [BR:
eak03400
]
EKH55_3346
Enzymes [BR:
eak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKH55_3346
DNA replication proteins [BR:
eak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EKH55_3346
DNA repair and recombination proteins [BR:
eak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EKH55_3346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
PAS_4
PAS_7
RNase_H_2
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
QFI68220
LinkDB
All DBs
Position
1:3426719..3428863
Genome browser
AA seq
714 aa
AA seq
DB search
MVMRLGLRSRILLFFVAIAAGATGALGLGLWGAYHHAATPEVVEALLQVAAVGSVGMFVI
VACIWLLFDRHLARPIEAIASAMRARAHAKVEQEIDHHEVRYLGDLAAAASMTTAALSET
RNALAETVARETARLSADNQKLAQLLADVPPAVLLCTGRHHLAFYNSSAQEMLATAEIPV
CLGRSLFDYLSDGALRSAYQRLVEMNTPDAILEFVCTAPRRRRLAGRMRLTGGTGHDAGA
YVLTLRDVTEEVAACARRDVLLSDVFLTIRPAIEALKESAHRLEVASGDGGEALIMRDII
GLEHAVQALEPRFEACQADSWPMAWVDASELAHQVRSELSVSGIAVDIDADALAARCNMP
DIVSLFAHLARQIARDRAVRKFVFSVREFQAEGRASLEWGGPALSVGLLQQWLREPADDQ
SPAPDAILRAHRTTLSSSFREGRSSLSMSLQQVKKLQPVPARLPRTVTYDFELLSLPRYD
RIAEARLDDLAYVVFDTETTGLFPERGDEIVQIAAVRIVNGKRVEGETFESLVNPGRRIP
AASSAVHRITDTMVEDAPGAADVVRRFHRFCEGAVLVAHNAPFDMEFLYRRENELRISFA
NPILDTVLLSAVVFGRQQAHTLDALCQRLGVSLTEAVRHTAMGDAVATADAFLRLQAIIA
GRGLERLGDLLAEVYRHRKLVPGSPPEVTRAMKSRLAPHSKQRRFHPTRHARGA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgcgactgggtttgcgaagtcggattttgcttttctttgtcgccatcgccgcg
ggcgcgacaggggcgctcggcctcggcctatggggtgcctaccaccacgcggccacccca
gaagtagtcgaagctctcctccaggttgcagccgtgggaagcgtcggcatgtttgtgatc
gtcgcctgtatctggctgctgttcgaccgccatctggcccgtccgatcgaggcgatcgct
tcggccatgcgggcgcgggcgcatgcaaaggtcgagcaggagattgaccaccatgaggtg
cgctatctcggtgacctggccgcggccgcttcgatgaccacggccgcattgagcgagacc
cggaatgcactggccgaaaccgtggcgcgcgaaacggcccggctttccgccgacaatcag
aagctggcgcaattgctggccgacgtgccgccggcggttctcttatgcaccgggcgtcat
catctcgcattctacaatagctccgcccaggaaatgctggcgacggccgagatcccggtc
tgtctcggccggagcctgttcgactacctgagcgacggtgccctcaggtctgcatatcag
cgccttgtcgagatgaataccccggacgcgatattggaatttgtttgcaccgctccacgg
cggcggcgacttgccggccgaatgcgactgaccggcggcaccggtcatgacgccggcgcc
tacgtgctgaccttgcgcgacgtgacggaagaggttgccgcctgtgcaaggcgcgacgtg
ctgctgagcgacgtcttcttgacgatccggccggcaatcgaagcgctgaaagagagcgcc
catcgtcttgaggtcgcgtccggcgacggcggcgaagccttgatcatgcgcgacatcatc
ggcctcgagcatgcagtgcaggcgctcgagcctcgttttgaggcctgtcaggccgatagc
tggcccatggcatgggtggacgccagcgaactcgcacatcaggtacgaagcgaattgtct
gtttccggcattgcggtcgacatcgatgccgatgcgcttgcggcgcggtgcaacatgccc
gatatcgtgtcgctctttgcacatctcgcccggcagatagcgcgggatcgggctgtgcgt
aagttcgtcttctccgtccgcgagttccaagccgaaggaagagcaagtctggagtggggc
gggccggctctctccgttggcttgttgcagcagtggctccgtgagcctgcggatgatcag
tcgccggcaccggatgcgattcttcgcgctcatcgaacgacactctcctcgagcttcagg
gagggccgatcatccctgagcatgagtctgcagcaggtgaagaagctgcaaccggttccg
gcccgcctaccccgaaccgtcacatacgatttcgaacttctgtcccttccgcgctacgac
aggattgccgaggctcgcctcgacgatcttgcctatgtcgtgttcgacacggagaccact
ggcctgttccccgagcggggcgatgagatcgtgcagattgccgcggtccgcatcgtcaat
ggaaagcgcgtcgaaggggaaacattcgaatcgctggtcaatcccggccggcgcattccc
gcggcctcgtctgcggtccaccgaatcaccgataccatggtcgaggatgcaccgggcgcg
gccgacgtcgttcggcgatttcaccgcttttgcgagggcgcggtactcgtcgcccacaat
gcgccgttcgacatggagttcctgtaccggcgggaaaacgagctccgcataagctttgcg
aatccgatcctcgatacggttctgctgtccgcagttgttttcggtcggcagcaggcccat
acgctggatgcactttgccagcgccttggcgtcagcctgacggaagcggtgcgccatacg
gcgatgggtgatgcggttgcgaccgcggatgcattcttgcgattgcaggcgataattgcc
ggacgcgggctcgaacgtctcggtgatctgctcgcggaagtctaccgccatcgcaagctc
gtgcccggaagtcccccggaggtcacgcgtgcaatgaagtcgaggttggctccccattca
aagcaacggcgctttcatccaacccggcatgcgcgtggagcatga
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