Sinorhizobium alkalisoli: EKH55_3365
Help
Entry
EKH55_3365 CDS
T06241
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak03030
DNA replication
eak03410
Base excision repair
eak03420
Nucleotide excision repair
eak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKH55_3365
03410 Base excision repair
EKH55_3365
03420 Nucleotide excision repair
EKH55_3365
03440 Homologous recombination
EKH55_3365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eak03032
]
EKH55_3365
03400 DNA repair and recombination proteins [BR:
eak03400
]
EKH55_3365
Enzymes [BR:
eak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKH55_3365
DNA replication proteins [BR:
eak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EKH55_3365
DNA repair and recombination proteins [BR:
eak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EKH55_3365
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKH55_3365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
IMS_HHH
HHH
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QFI68239
LinkDB
All DBs
Position
1:complement(3448752..3451766)
Genome browser
AA seq
1004 aa
AA seq
DB search
MKNGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVT
PTHFAVIFDYSSKTFRNVLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEA
DDLIATYARLAEEAGADVTIVSSDKDLMQLVTPKVSMYDSMKDKQITIPDVIEKWGVPPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEAYGDLDTLLARAGEIKQQKRRESIIANA
ERARLSRELVTLKRDTPLDVDLDDLRLDSQDGPKLIAFLKAMEFNTLTRRVAAATETDAE
AIEAAHVPVEWGAEAHGPDLDAGEAAGPPPSPGSSSAAPPRGDAAKAAVSFAAGRGDVDA
TGATPQDLAQTRADIFAKAPFDPASYVTIRDLDTLDRWISAGRDAGLVGFDTETTSLDPM
RADLVGFSLAIANYGNGPSGTKIRAAYVPLIHKSGVGDLLGGGLVENQVPAGEALSRLKI
LLEDPSVLKVAQNLKYDYLVMRRHGITVESFDDTMLMSYVLDAGTGAHGMDSLSERWLGH
TPIAYKDIAGSGKAAVSFDFVEIDKATAYAAEDADVTLRLWHVLKPRLAAKGLTRVYERL
ERPLIAVLARMEERGITVDRQILSRLSGELAQGAAALEDEIYRLAGESFTIGSPKQLGDI
LFGKMGLPGGSKTRTGQWSTSAQVLEDLAAIGHELPRKIVDWRQLTKLKSTYTDALPGFV
HPETKRVHTCYALAATTTGRLSSSEPNLQNIPVRTAEGRRIRTAFIATPGHKLVSADYSQ
IELRVLAHVADIPQLRQAFADGVDIHAMTASEMFGVPVEGMPSEIRRRAKAINFGIIYGI
SAFGLANQLSIERSEAGDYIKRYFERFPGIRDYMESTKAFAREHGYVETIFGRRAHYPDI
RSSNPSMRAFNERAAINAPIQGSAADVIRRAMVKMEPALEEAKLTARMLLQVHDELIFEV
EDGEIERAIPVIVSVMENAAMPALSMKVPLKVDARAAHNWDEAH
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatggtgatcatctcttcctcgtcgacggctcgggcttcatcttccgggcgttc
cacgccatcccgccgctcaaccgcaaatcggacggcctgccggtcaatgcggtggccggc
ttctgcaacatgctgtggaagctgctgacggatgcgcgcgacacctccgtcggcgtgacg
ccgacgcatttcgcggtgatcttcgactattcctcgaagaccttccgcaacgtgctttac
gaccagtacaaggcgaaccgcaccgcgccgccggaagacctcatcccgcaattcggactg
attcgccatgccacccgcgccttcaacctgccctgcatcgaaaaggaaggctatgaggcg
gacgatctgatcgccacctatgcgcgcctcgccgaggaggcgggcgccgacgtcacgatc
gtctcgtcggataaggacctcatgcagctcgtgacgccgaaggtgtcgatgtatgacagc
atgaaggacaagcagatcaccattcccgacgtcatcgagaaatggggcgtaccgccggag
aagatgatcgacctccaggcgatgaccggcgattcgaccgacaacgtgccgggcatcccc
ggcatcggaccgaagacggcagcccagcttctggaggcctatggcgacctcgacacgctg
cttgcccgtgcgggcgagatcaagcagcagaagcggcgcgagtcgatcatcgccaatgcc
gaaagggcgcggctgtcgcgcgaactggtcaccttgaagagggacacgccgctcgacgtc
gacctcgacgatctcaggctcgattcgcaggacggtccgaagctcatcgcctttctcaag
gcgatggagttcaacacgctgacgcgccgcgtcgcggccgccaccgagacggatgcggag
gcgatcgaggcggctcacgtgccggtcgagtggggcgccgaggcgcatggtccggatctc
gacgccggcgaggccgccggcccgccgccgtcgcccggttcgtcgagtgccgccccgccg
cgcggagacgcggcaaaggcggcggtatcttttgccgccggcaggggcgatgtcgacgcc
actggggcgacaccgcaggatttggcgcagacgcgcgccgacatcttcgccaaggcgccc
ttcgatcctgccagctatgtgacgatccgcgatctcgacacgctcgaccgctggatttcc
gccgggcgcgacgcggggcttgtcggcttcgacacggagacgacctcgctagatccgatg
cgggccgatctcgtcggcttttcgctggcgatcgccaattacggtaacggcccgtccggc
acgaagatccgtgccgcctatgtgccgctcattcacaagagcggcgtcggcgatctgctg
ggcggcggcctcgtcgaaaaccaggtaccggctggcgaggccttgagccggctaaagata
cttctcgaggacccttccgttctcaaggtggcgcagaacctgaaatatgattacctcgtc
atgaggcggcacggcatcaccgtcgagagtttcgacgacacgatgctgatgtcctatgtg
ctcgatgccggcaccggcgcgcatgggatggattcgctctcggaacgctggctcggccac
acaccgatcgcctacaaggacatagccggcagcggcaaggctgccgtgagcttcgacttc
gtcgagatcgacaaggcgaccgcctatgcggccgaggatgcggacgtcacgctgaggctg
tggcacgtgctgaagccgcggcttgccgccaaaggcctgacgcgcgtttacgagcggctc
gaaaggccgctcatcgcggttctcgcgcggatggaggagcgcggcatcaccgtcgaccgc
cagatcctctcgcgcctctccggggagctggcgcagggggcggcggcgctcgaggacgag
atctaccggctggcgggcgaaagcttcaccatcggctcgccgaagcagctcggcgacatc
ctgttcggcaagatgggcctgcccggcggttcaaagaccaggaccggccagtggtcgacc
tccgcccaggtgctcgaggatctggccgcgatcggccacgaactgccgcgcaagattgtc
gactggcgccagctcaccaagctcaaatcgacctatacggatgcgctccccggtttcgtg
catcccgaaacgaagcgggtccacacctgctatgcgctggccgcgacgacgaccggccgc
ctctcctcctcggagccgaacctgcagaatattccggtgaggaccgccgaggggcgccgt
atccgcacggccttcatcgcgacgccggggcataagctggtctcggcggactacagccag
atcgagcttcgggttctcgcgcatgtggcggacatcccgcagctgcgccaggccttcgcg
gacggggtcgacatccatgcgatgaccgcctccgaaatgttcggcgttcctgtcgaaggc
atgccaagcgagatccgccgccgcgccaaggcgatcaatttcggcatcatctacggcata
tccgccttcggcctcgcaaaccagctgtcgatcgaacggtcggaagcgggcgattacatc
aagcggtatttcgagcgcttccccggcatccgcgactacatggagagcaccaaggccttc
gcgcgcgagcacgggtatgtggaaacgatcttcgggcgtcgagcccattatccggatatc
cgctcctccaacccctcgatgcgcgccttcaacgaacgcgccgcgatcaacgccccgatc
caggggtcagccgccgacgtcatccgccgggccatggtcaagatggagccggcgctcgag
gaggcgaagcttaccgcccgaatgctgcttcaggttcacgacgaactgatcttcgaggtg
gaggacggcgagatcgagcgcgccattccggtgatcgtctcggtgatggagaacgccgcg
atgccggcgctgagcatgaaggtgccgctgaaagtcgacgcgcgcgcagcacacaactgg
gacgaggcgcactag
DBGET
integrated database retrieval system
