Sinorhizobium alkalisoli: EKH55_3470
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Entry
EKH55_3470 CDS
T06241
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
eak
Sinorhizobium alkalisoli
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eak03016
]
EKH55_3470
Enzymes [BR:
eak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EKH55_3470
Transfer RNA biogenesis [BR:
eak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EKH55_3470
Prokaryotic type
EKH55_3470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QFI68344
LinkDB
All DBs
Position
1:3557877..3558812
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AA seq
311 aa
AA seq
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MSKPRKPKGRPISGWLILDKPLDYGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEERSTDDLEGEVVRSSAERPSEEAIRALLPKYTGVI
AQVPPQFSAIKIDGERAYDLARDGETVEIPAREVEVFRLSLIGCTPHLAQFEIECGKGTY
VRSLARDMGRDLGCFGHIASLRRTFVAPFGEEDMVPLAELVALEKIEDEAERLAALDGCL
IETGEALSDLPHVAVNDDQAYRLRMGNPIILRGRDAPLPAPEAYATARGKLVAIGEVAEG
EFRPKRVFAGQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgcgcaaacccaagggccgtccaatctcgggctggcttattctcgacaag
ccgctcgactacggttccaccgaagcggtctccaagatcaagtggctgttcaaggcacag
aaggcgggtcacgccggcacgctggatccgcttgcctccggaatgctgccgatcgcgctt
ggggacgcgacgaagaccgttccctatgtgatggatggccgcaagatctacgaattcact
gtggcctggggcgaggaacgctcgaccgatgacctcgaaggcgaggtcgtccgctcgtcg
gccgagcggccgagcgaggaggcgatccgcgctttgctgccgaaatatacaggtgtcatc
gcacaggtgccgccgcagttttcggcgatcaagatcgacggcgagcgcgcctacgacctc
gcgcgcgacggcgagaccgtggagattccggcgcgggaggtcgaggttttccgtctgtcc
ttgatcggctgcacgccgcatctggcccagttcgagatcgaatgcggcaagggaacctat
gtccgctcgcttgcccgcgacatgggccgcgacctcggctgcttcggccatatagcatca
ctccgccgcaccttcgtcgctcccttcggcgaggaggacatggtgccgcttgccgaactc
gttgcgctggaaaagatagaggacgaggcggagcggcttgccgccctcgacggctgcctc
atcgagaccggcgaagcgctttccgacctgccgcatgttgcggtcaacgacgatcaggcg
taccgactccggatgggaaatccgatcatcctgcggggtcgagacgcgcctctgccggcc
cctgaagcctatgccacggcgcgcggcaagctcgtcgccatcggggaggtcgccgagggt
gaattccggccgaagcgcgtatttgccggtcagtga
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