Sinorhizobium alkalisoli: EKH55_3503
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Entry
EKH55_3503 CDS
T06241
Name
(GenBank) Ribonuclease D related protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eak
Sinorhizobium alkalisoli
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eak03016
]
EKH55_3503
Enzymes [BR:
eak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EKH55_3503
Transfer RNA biogenesis [BR:
eak03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EKH55_3503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QFI68377
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All DBs
Position
1:3588947..3589573
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AA seq
208 aa
AA seq
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MANTIRFHEGDISATDAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGSADVIRIAAG
QRQAPNLVAMLADPARQKIFHFGRFDIAVLFHTFGVTAAPVFCTKIASRLTRTYTDRHGL
KDNLKELLDVDISKQQQSSDWAADILSPAQLEYAASDVLHLHALRDRLTERLLRDGRIEH
AEACFAFLPTRAKLDLLGWEETDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatacaataaggttccacgaaggcgatatttccgcgacggacgccgcgcgctat
acgggtgcgatcgccatcgacacggaaacgctgggccttgtcccccgccgcgaccgcctt
tgcgtcgtgcagctctccccgggcgacggcagcgccgacgtgatccgcatcgccgccggc
cagaggcaagcgccgaatctcgtagcgatgctcgccgatcccgcccgccagaagatcttc
catttcggccgcttcgatatcgcagtgctgttccacaccttcggcgtcacggcggcgccc
gtcttctgcacgaagatcgcctcgcgtctcacccgcacctatacggaccggcacgggctc
aaggacaatctcaaggaactgctcgacgtcgacatttccaagcagcagcaatcgtccgac
tgggccgccgatatcctctcgccggcgcagctcgaatatgcggcttccgacgtgctccat
ctgcatgccttgcgcgacaggctgaccgaacgcctcctgcgcgacggccgcatcgagcat
gccgaagcctgcttcgccttcctgccgacacgggccaagctggacctgctcggctgggaa
gagaccgatattttcgcccacagctga
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