Sinorhizobium alkalisoli: EKH55_3676
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Entry
EKH55_3676 CDS
T06241
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EKH55_3676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eak03400
]
EKH55_3676
DNA repair and recombination proteins [BR:
eak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EKH55_3676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
SSFA2_C
Motif
Other DBs
NCBI-ProteinID:
QFI68550
LinkDB
All DBs
Position
2:62413..63300
Genome browser
AA seq
295 aa
AA seq
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MAPRASWKGYLRLSLVSCPVRLYPATSTSDRIAFNQLHKDTHNRINMKPVDPELGLVERS
DLVKGYEYEDKKYIIIEDSDLESVKIESNHTMNIEAFVEEETVDVIYRDAPYYLAPDGAM
AEETFIVLREALRRTGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADYFG
NIPVGNPDPEMLELAEALIKQKATVFDPKNYEDRYEVALMKMIREKLKGHKPIIAAAPER
GNVINLMDALKASLSQAKPPAPSKSKAKAEPASPQAAKPAPTRRTVSKPAAKKKV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcacccagggcaagttggaaaggctatctgagactgagcctcgtaagctgtcccgta
cggctttacccggccacttcgacgagcgatcgcatcgccttcaatcaattgcacaaagac
acgcacaaccggatcaatatgaaaccggtcgatccggaactgggactcgtcgagcgctcc
gatctcgtcaagggctacgaatacgaggacaagaaatacatcatcatcgaggattccgac
ctggaaagcgtcaaaatcgaatccaaccacacgatgaatatcgaggccttcgtcgaggaa
gagaccgtggacgtcatctaccgcgacgcgccttattacctggccccggacggggcaatg
gcggaggagaccttcattgttctgcgcgaggcgctgcgcaggaccggcaagctcgcaata
gcacgcctcgtgctctcgagccgcgagcgcgtcgtcaccatcggtccgcgcgagaccggc
atgttcgtctgcaccctgcgcaacccgaatgaggtgcgcggcacggccgattacttcggc
aacatccccgtcggcaatcccgatccggaaatgctcgagcttgcagaggcgctcatcaag
cagaaagccacggttttcgatccgaagaactacgaagatcgttatgaggtggcgctgatg
aagatgatccgcgagaagctcaagggccacaagccgatcatcgcggccgcgcccgaacgc
ggcaacgtcatcaatctcatggacgcgctgaaggcgagcctctcgcaggcgaaaccgccc
gccccgagcaagagcaaggccaaagctgagccggcctccccacaggccgctaagcctgcg
ccgacccggcggaccgtgtcaaagcccgccgccaagaagaaagtctga
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