Sinorhizobium alkalisoli: EKH55_4968
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Entry
EKH55_4968 CDS
T06241
Name
(GenBank) Type I secretion system ATPase, LssB family LapB
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EKH55_4968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eak02000
]
EKH55_4968
02044 Secretion system [BR:
eak02044
]
EKH55_4968
Transporters [BR:
eak02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
EKH55_4968
Secretion system [BR:
eak02044
]
Type I secretion system
Adhesin protein transporter
EKH55_4968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QFI69842
LinkDB
All DBs
Position
2:1374995..1377169
Genome browser
AA seq
724 aa
AA seq
DB search
MQSVDTRAKTGPVLTGFTTAFKEICIFLNRPSSETVLFSDVPFDARSPSFEDVSRLAERA
GLEAELVTRRACAGRNFHLPLLLVFRDGRSVAILEESPGGALSFSNASSPDSELLRFADL
RLDDVAYAVSFSATYLNTTGGPGVGEARDIDRRHWLTATVKPFWQAYAQVALAAFFINVL
ALATPLFTMNVYDRILPNKAISTLWVLALGISVAILFDFLLKTVRAALIDFAGRKADLKL
SYLLFEKILHATLASRPQSTGEYANRVMQFEFVREFFTSNTVSTLIDSLFAFVFIAAVYA
IAGWLAVIPAIAFVCSVLIGYVAQRKIGNRVAAASNESAQRQAMLVETIGAIETVKTLHS
EKLLLRRWNELGKHSSNTSEQIKHISSWASHATQFVQQLVTVCIVVAGAYEFTVGNISTG
AIIGASMLAGRAVAPLGQIALTLARLRQALLSLRILNSVMEQPEDRPNTVGFVNRDIRDG
SITLANVDFAYPGSDHKVIHGMNASIKAGERVGIIGRIGSGKTTIGRLLAGLYAPSAGRI
LLDGVDIRQFHPSVVRSAVSFVSQSSDLFSGTVKDNLLMANPTASDEDMVKAAKLAGVDD
FVSHHPRGYDMPVGERGSQLSGGQRQAVAIARLLLRKPKIVFLDEPSGAMDLASERDLIN
RLSTVFGGDVTVLISTHRHSMLHLVDRLLVLDHGRIVADGPKSQVIDQLQKRGGTSGAAS
GASA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcgttgacacgcgagcaaaaaccggaccggtactgaccggcttcacgaccgcg
ttcaaggagatctgcatcttcttgaatcggccgtcgtcggaaactgtgcttttttcggac
gtgccgttcgacgcccgctcgccgagtttcgaggacgtgtcgcgtcttgcggaacgcgcc
ggcctcgaggcggaactcgtcacccgacgcgcttgcgccggccgcaatttccacctcccg
cttctcctcgtcttccgcgacggccgctcggttgcgatcctggaggagagccccggtgga
gcgctgagcttttcgaatgcgtcgtctcccgatagcgagctcctccgtttcgcggacttg
cgtctggatgatgtcgcctatgccgtttcgttttcggcgacctatctgaatacgacaggc
ggtccgggggtgggagaggcacgggacatcgaccggcggcattggctgaccgcgaccgtc
aaaccattctggcaggcctatgcgcaagtcgcgcttgcggcgttcttcatcaacgtgctc
gccttggcgacgcccctgttcacgatgaatgtctatgaccgcatcctccccaacaaggcg
atctcgaccctttgggtcctggcgctcggcatcagcgtcgccattcttttcgattttctg
ttgaagacggtgcgtgctgcgctgatcgactttgcgggacgcaaggcggacctgaagctt
tcctacctgcttttcgagaagatcctgcatgcaacgctcgcctcacgtccgcaatcgacg
ggcgaatacgccaaccgcgtcatgcaattcgagttcgtgcgagaattctttacctcgaat
accgtcagcaccctcatcgatagtcttttcgccttcgtcttcatagccgccgtctatgct
atcgccggatggctggcagtcatcccggcgatcgccttcgtctgcagcgtgctcatcggt
tatgtggcgcaacgcaagatcggaaaccgcgttgccgcggcctcgaacgaatccgcccag
cgccaggccatgctcgtggaaacgatcggcgcgatcgagaccgtcaagacgctgcattcg
gagaagttgctgcttcgccggtggaacgagctcgggaagcactcttcgaacacgtccgag
cagatcaagcacatttcctcctgggcctcgcatgccacgcaattcgtgcagcaactcgtc
accgtctgcatcgtggtggcgggggcctatgaattcaccgtgggcaacatctccaccggt
gcgatcatcggcgccagcatgttggctggacgggcggtcgcgccgctcggccagatcgct
ttgacgcttgcgcggcttcgccaggcgcttctgtcgttgagaatattgaattccgtcatg
gagcagcccgaagaccggccgaacacggtcggcttcgtcaatcgcgacattcgcgacgga
agcatcactcttgccaatgtggatttcgcctatcccggcagtgaccacaaggtgatccat
ggcatgaacgcgagcatcaaggcgggcgagcgggtcggcatcattggccgcatcggctcc
ggcaagacgacgatcggccggctgctggccgggctctatgccccaagtgcaggccgtata
ttgctcgacggcgtcgacatccggcaattccacccgtcggtggtgcgctcggccgtgtct
ttcgtctcgcaaagctcggatctgttttccggcaccgtcaaggacaatctgctgatggcc
aatccgaccgcgagtgatgaggacatggtcaaggcggcaaagcttgcgggcgtggacgat
ttcgtatcgcatcacccgcgcggttatgacatgccggtcggcgaacgtggttcgcagctt
tccggcgggcagcgccaggcggtcgccattgcgcgcctgctccttcgcaaaccgaagatc
gtttttctggacgagccatccggcgccatggatctggccagcgagcgggacctgatcaac
cggctctctaccgtcttcggcggggatgtgaccgtcttgatctccacccatcggcatagc
atgctccatctcgtcgatcggctgctggtccttgatcacggacgcatcgttgccgatgga
cccaagtcgcaggtgatcgaccagttgcagaagcgaggcgggacgagcggtgctgcctca
ggggcgagcgcatga
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