Sinorhizobium alkalisoli: EKH55_5209
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Entry
EKH55_5209 CDS
T06241
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EKH55_5209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eak03400
]
EKH55_5209
DNA repair and recombination proteins [BR:
eak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EKH55_5209
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
DUF5788
Motif
Other DBs
NCBI-ProteinID:
QFI70083
LinkDB
All DBs
Position
2:complement(1616896..1617738)
Genome browser
AA seq
280 aa
AA seq
DB search
MALRATWKGHIKLAELTFPVALYAGATTSKRVSFHVLNRKTGHRVHRQYIDEQTEKPVEK
EEQVKGYELDDDRFVILEPDEIAEAVPESDKTLRIEAFIDCPQVDTVYFDKPYFIAPSGS
IATDPFSLLREGMRRKKVAALARAVLFRRVRTVMLRAQGPGLVAHTLNFDYEVRSAEEAF
KDIPEIKIEGEMLDLAKHIIDTKKGEFNPREFDDRYDEALAELVKAKMEGRAIKAPKRPK
EEKVTSLLEALRQSAGATKAKPPAPSKRRKATSEKRRKAS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctacgggcaacatggaaggggcacatcaagctggccgagctcacgtttccggtt
gccctgtacgcgggggcaacaacctccaagcgcgtctcgttccatgtgctcaaccgcaag
accggccaccgcgtccatcgccagtatatcgacgagcaaacggaaaagccggtcgagaag
gaagagcaggtcaagggctacgaactcgatgacgaccggttcgtcattctcgagccggac
gagatcgccgaagcagtccccgagagcgacaagacgctgcgcatcgaagcgttcatcgat
tgcccgcaggtcgataccgtctatttcgacaaaccctatttcattgccccctccggctcc
atcgccaccgatccgttcagcctgctgcgcgagggtatgcgccgcaagaaagtggcggcc
ctggcaagggccgtgctgttcaggagggtgcgaacggtgatgctgcgggcccaaggcccc
ggccttgtcgcccataccctgaactttgactatgaagtgcgctcggccgaggaggccttc
aaagacatccccgagatcaagatcgagggagaaatgctcgatctcgccaagcacatcatc
gataccaagaagggcgagttcaacccgcgcgagttcgatgaccgttacgatgaagcgctg
gccgaactggtcaaggccaagatggagggccgcgcgatcaaggcgcccaagcggcccaag
gaggagaaggtcaccagtctcctcgaggcgctgcggcagagtgcgggcgctaccaaggcg
aaaccgccggcgccgagcaagcgcaggaaggccacatccgagaagcggcgcaaggcgagc
tga
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