Sinorhizobium alkalisoli: EKH55_5388
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Entry
EKH55_5388 CDS
T06241
Name
(GenBank) Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKH55_5388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eak02000
]
EKH55_5388
Transporters [BR:
eak02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EKH55_5388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
NNH2
Motif
Other DBs
NCBI-ProteinID:
QFI70262
LinkDB
All DBs
Position
2:complement(1807819..1809720)
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AA seq
633 aa
AA seq
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MITRRTALGMLASTALPRSLLGATRELDALAPLVAEGKVPPLNERLPKIPRVIKVAAMGR
EPGRHGGRLRMLIGSAKDIRLMTIYGYARLVGYDENLDLHPDVLEGYETEEDRIFTFRLR
EGHKWSDGTPLTAEDFRYCWEDVLLNEKLSPAGLPTALVIDGEAGKFETLDERTLRYSWS
VPNPDFLQKLAAPQPLVIAVPSAYLKQFHEKYQDEEKLKAILRQERLKKWSQLHMRMARS
YRPENPDLPTLDPWRNTTPLPAEQFIFERNPYFHRVDENGLQLPYIDRFVLSVSSSALIP
AKAGTGESDLQATGIDFVDYTFLKDAEKRYPVKVKLWKKTQGSRLALLPNLNCADPVWRP
LLRDVRVRRALSLAIDRREINMAMFYGLTKESADTVLPESPLFAPEFASAWIAHDPDRAN
ALLDEAGLVERDSDGIRFLPDGRRAQIVVETPGESTLDTDVLQLVADYWHKVGISLFIRA
SQRDTFRSRAVGGEIIMSLWFGIDNGVPTADMNPGQLAPTADDQLQWPVWGLNYMSHGEM
GEAPDMPSVVELLKLLKRWRLSSDAAEREEIWKEMLSIYTDQVFSIGLVNASLQPILVTE
KLRNFPDEGLYGFDPTSYFGVYKTDTFWLEEGN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacgcgaagaaccgcgctcggcatgctcgcctcgacggcgttgccgagatcgctg
ctcggcgccacgcgcgagctcgacgctctggcgccgctcgtcgctgaaggcaaggtgccg
ccgctgaatgaacgactgccgaagatcccgcgggtaatcaaggtcgctgcgatgggacgg
gaaccgggccgccatggcggcaggctccgtatgctgatcggcagcgctaaggatattcgc
ctaatgacgatctacggctatgcccggctggtcggctacgatgagaatctcgaccttcac
cccgatgttctcgagggctatgagacggaagaggatcgcatcttcaccttccgcctgcgt
gaaggtcacaaatggtcggacggcacgccgctgacggcggaggacttccgctattgctgg
gaggatgtgctgcttaacgagaaattgtcgccggctggcctgccaacggcactggtcatc
gatggggaggctgggaagttcgaaaccctagacgagcgcaccctgcgctattcctggtcg
gtgcccaacccggatttcctccagaagcttgccgcgccgcagccactggtcattgccgtg
ccgtccgcctacctcaagcagttccacgagaagtaccaggacgaggaaaagctgaaggcg
atcctcaggcaggagcgcctgaagaagtggagccaattgcatatgcgcatggcgcgctcc
tatcgccctgaaaatccggatcttccaacgctcgatccctggcgcaacaccacgccgctg
ccggccgaacagttcatcttcgagcgcaacccgtatttccatcgcgtcgacgaaaacggc
ctgcaattgccctatatcgaccggttcgtgctcagtgtcagctcgtccgcgctcattccg
gcaaaggccggcacgggtgagagcgacctgcaggcgaccggcatcgactttgtcgactac
actttcctcaaggatgctgagaagcgttatccggtgaaggtcaagctgtggaaaaagacg
caaggttcgcgccttgcgttgcttccgaatctcaactgcgcagatccggtctggcggccg
ttgctgagagacgtgcgcgtccgccgggccctgtcgctggcgatcgacaggcgcgaaatc
aacatggcgatgttctacggcctgacgaaggaaagcgccgataccgtcctgccggagagc
ccgctcttcgcgcctgaattcgccagtgcctggatcgctcacgatccggatcgcgccaat
gcgctgcttgacgaggccggtctcgtcgaacgcgacagcgacggcatccgtttcctgccc
gacgggcgcagggcgcaaatcgtcgtggaaacgcccggcgaaagcacgctcgatacggat
gtgctccagcttgtcgccgactattggcacaaggttggcatatcgctcttcatccgtgcc
tcgcagcgcgataccttccgcagccgcgccgtcggcggcgagatcatcatgtcgctgtgg
ttcggcatcgacaacggcgtgccgacggcagacatgaatcccggccagctcgcgccgact
gcggatgaccagttgcaatggccggtctgggggctcaactacatgtcccacggcgagatg
ggtgaggcgcccgatatgccgtcggtcgtcgagcttctcaagcttctcaagcgctggagg
ctttcctccgacgctgccgagcgggaagagatatggaaggagatgctctccatctacacg
gaccaggtcttctcgataggactggtcaacgcatcgctacagccgatcctcgtcacggag
aaactgcgcaacttcccggatgaggggctctatggcttcgatccgacgagctatttcggc
gtctacaagaccgatacgttctggctggaagagggcaactga
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