Sinorhizobium alkalisoli: EKH55_6001
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Entry
EKH55_6001 CDS
T06241
Name
(GenBank) Nitrogenase (molybdenum-iron)-specific transcriptional regulator NifA
KO
K02584
Nif-specific regulatory protein
Organism
eak
Sinorhizobium alkalisoli
Pathway
eak02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
eak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EKH55_6001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eak03000
]
EKH55_6001
Transcription factors [BR:
eak03000
]
Prokaryotic type
Helix-turn-helix
Other families
EKH55_6001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
Mg_chelatase
AAA_2
AAA
GAF_3
MCM
AAA_30
TIP49
AAA_3
GerPE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QFI70875
LinkDB
All DBs
Position
unnamed:438287..439963
Genome browser
AA seq
558 aa
AA seq
DB search
MLHNGLNEGMTERTAQTMHKPDFWASGIYRVSKVLIGPANLETKLANVIKALSAILPMRR
GAIVVLNAGGAPELVATLGVEQASQGARCIPAKAAIDRILAKGAPLVVPDTCKSDLFQAE
LQTSSNATGPTTFVGVPMKVDQETLGTLWLDRAKDGGTRIQFEEEVRFLSMIANLAARAV
RLDRHQSRDGQSILGEEGARKTSSGEKELPEPAPQRPTKIDWIVGESPALKQVVESVKVV
AITNSAVLLRGESGTGKEFFAKAIHELSPRRKKPFVKLNCAALSAGVLESELFGHEKGAF
TGAISQRAGRFELAHGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLKVDVRLI
CATNKDLEAAVADGEFRADLYYRINVVPIFLPPLRERNGDISRLARVFLDRFNRENNRDL
TFTPAALELLSKCNFPGNVRELENCVRRTATLARSGTILPSDFSCLKDQCLSSMLWKSAD
RPLAGNTLNGTVESPVSFGYSTGPAGLTVAPHLTDRELLISAMEKAGWVQAKAARILGLT
PRQVGYALRRHRIQVKKI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacaatgggctcaatgagggtatgactgaacgaaccgctcaaaccatgcacaaa
ccggatttctgggccagcggtatctatcgggtatcgaaagtcttgattggtccagccaat
ctcgagaccaagctcgccaatgtcattaaggccctctccgcaattctcccaatgcggcgc
ggcgcaatcgtcgttctgaatgctggaggagcgcccgagctggttgcaacgctcggcgtg
gagcaagcatctcaaggcgctcgctgcattccggcgaaggctgcaatagacagaatcctc
gcaaaaggcgcgccactggtcgtaccggacacttgcaagtcggacctgttccaggctgag
cttcaaaccagctcgaacgccaccggcccgaccaccttcgttggcgtcccgatgaaggtg
gatcaagaaacgcttggaacactatggctcgaccgcgccaaggatggcggcaccaggata
caattcgaggaagaggtgcgtttcctgtccatgattgccaaccttgcggcccgggccgtt
cggttggatcgccaccagagccgcgatggtcagtcaatcttgggcgaggaaggagcccgc
aagactagttcaggcgagaaggaactccccgaacctgccccacaacgccccacaaaaatc
gattggatcgttggggaaagccctgcgctcaaacaggtggtcgaaagcgtcaaagttgtt
gcaataaccaattctgcagtgcttctcaggggtgaaagcggcacaggcaaggagttcttt
gccaaggccatccacgagctttcacctcgaagaaagaagcccttcgtgaagttgaactgc
gccgcactgtctgcaggcgtcctggaatcggaactgtttggacatgaaaagggcgccttt
actggggccatctctcagcgcgcaggtcgtttcgaattggcgcacggtggaaccctgctg
ctcgatgagatcggcgagatttcgccggcctttcaagcgaaactgttgcgcgtcctgcag
gagggtgagcttgagcgagtcggcggcacaaaaacactcaaggtggacgttcgactcata
tgcgccacgaacaaggatctagaggcggcagtcgcggatggggagttcagggccgacctc
tactaccggatcaatgtggtacccatatttttgccgcctctcagggagcgaaatggagat
atttcacgccttgcgagggtttttctcgaccgattcaaccgagaaaacaatcgggatctc
acattcacgccggctgcgctcgagctcttgtcaaaatgcaactttcccggcaacgtccga
gagcttgaaaattgcgtccggaggaccgccactctcgcgcgttcggggacgatccttcca
tcagatttctcctgtctgaaagaccaatgcctttcttcaatgctctggaaaagcgctgac
cgtccacttgcgggcaatacactcaatgggacggtcgaatccccggtcagcttcggttac
tccaccggaccggccggcttaacggtggcaccacatctaaccgaccgcgagttgctaatc
agtgctatggagaaggccggctgggttcaggcaaaggcagctcggattctgggcctcaca
ccgcggcaagttggctatgcattacgtcgccatcgtatacaggtgaagaagatctaa
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