Escherichia albertii: EAKF1_ch0144
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Entry
EAKF1_ch0144 CDS
T03986
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
eal
Escherichia albertii
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eal03016
]
EAKF1_ch0144 (rnb)
Enzymes [BR:
eal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EAKF1_ch0144 (rnb)
Transfer RNA biogenesis [BR:
eal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EAKF1_ch0144 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
OSR1_C
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
AHE58066
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All DBs
Position
154568..156502
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHSEKDRESAEPEELVEPFLTRFVGKIQGKNDRLAIVPDHPLLKDAIPCRAARGLTH
EFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLVREDLTSLDFVTIDSASTEDMDDALFARTLPDNKLQLIVAIADPTAWIAEGSK
LDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMTLSADGSIEDDIEF
FAATIESKAKLVYDQVSDWLENTGDWQPESDAIAEQIRLLAQICQRRGEWRHNHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFD
PANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLIDNGAIAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRIETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccc
cgcgctgaaggggtggtaaaagccacagaaaaaggctttggcttcctggaagtcgacgcg
caaaaaagttatttcattccgccgccgcaaatgaaaaaagtcatgcatggcgacagaatt
atcgcggtgatccacagcgaaaaagatcgtgaatccgcagaaccagaagaactggttgaa
ccgtttttgacccgcttcgtcggtaaaattcagggcaagaatgaccgcctggccatcgtc
cctgatcatccattattgaaagatgctattccttgccgtgcggcccgtggtctgactcac
gagtttaaagaaggcgactgggcggttgctgaaatgcgccgccatccgctaaaaggcgat
cgttccttctatgcggaattaacgcaatatatcaccttcggcgacgaccattttgtgccg
tggtgggtcaccctggcacgccataatctggaaaaagaagcaccagatggtgttgctacc
gaaatgctggatgaaggcctggtgcgtgaagatctgacctcgctggattttgtcaccatc
gacagcgccagtacggaagatatggatgacgccctcttcgccaggacattaccggataac
aagctgcaactgattgtggcgatcgccgacccaaccgcgtggattgcggaaggcagcaag
ctggataaagccgcgaaaattcgcgcattcaccaactacctgccgggcttcaacattcca
atgctgccgcgtgagctttctgacgatctctgctcattgcgtgccaatgaggtacgtccg
gcactggcatgtcggatgacgctgtccgctgatggcagcattgaagatgacatcgaattt
tttgccgctactatcgaatccaaagccaaactggtttatgaccaggtttctgactggctg
gaaaacaccggtgactggcagccagaaagcgacgcaattgctgaacaaattcgcctgtta
gcgcaaatttgccagcgccgcggcgaatggcgtcataaccacgcgctggtatttaaagat
cgcccggattaccgttttatcctcggtgaaaaaggtgaagtactggatatcgttgccgaa
ccacgtcgtattgctaatcgtatcgtcgaagaagcgatgatcgccgccaatatttgtgcg
gcccgcgtactgcgcgataaactcggctttggcatctataacgtgcatatgggcttcgat
ccagctaatgccgacgcgctggcagcgctgctgaaaacgcacggcctgcatgtcgatgct
gaagaagtgcttacgctggatggtttctgtaaactacgtcgtgaactggatgcacaaccg
accggtttcctcgacagccgcatccgtcgtttccagtcttttgcagaaatcagtaccgaa
ccaggtcctcactttggcctcggtctggaagcatatgccacctggacttcgccgattcgt
aagtatggcgatatgatcaaccatcgtctgctgaaagccgtcattaaaggtgaaacggcg
acgcgtccgcaggatgagatcactgtccaaatggcagagcgtcgtcgtctcaaccgaatg
gcggagcgtgatgtcggtgattggctgtacgctcgtttcctgaaagacaaggcggggact
gatactcgttttgcggcggaaatcgtcgatatcagccgtggtggtatgcgtgtgcgtctg
atcgacaatggcgctattgcctttattccggcaccattcttacacgctgtacgcgacgaa
ttggtttgcagccaggagaacggcaccgtacaaatcaaaggtgaaacggtttacaaggtg
actgacgttatcgacgtcactattgccgaagtccgcatagaaacccgcagcattattgct
cgcccggtagcataa
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