Escherichia albertii: EAKF1_ch0145
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Entry
EAKF1_ch0145 CDS
T03986
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
eal
Escherichia albertii
Pathway
eal02024
Quorum sensing
eal02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EAKF1_ch0145
02026 Biofilm formation - Escherichia coli
EAKF1_ch0145
Enzymes [BR:
eal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
EAKF1_ch0145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PdeR_N
PAS_9
PAS
GGDEF_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AHE58067
LinkDB
All DBs
Position
156765..158723
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AA seq
652 aa
AA seq
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MYNFLGSHNPYWRLSENSDVLRFSCNEATEPERTLLLSAEQAARIREMTVITSGLMMNLV
VEESDLSVHLVGRKINRREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS
RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMNRREAAISRRNNSGFFRSGNAYEVERWV
QTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRILANTDSITGLPNRN
AMQELIDNAIKQADGNKVGVVYLDLDNFKKVNDAYGHVFGDQLLREVSLAILSCLEQDQV
LARPGGDEFLILAPNTSQSALEAMASRILTRLRQPFSIGLIEVYTGCSVGISLSPQHGMD
SAAIIRHADTAMYTAKEGGRGQFCVFSPEMNQRVFEYLWLDTNLRKALENNQLVIHYQPK
ITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK
GINLRVAVNISARQLADQTIFTDLKQVLQELKFEYCPIDVELTESCLIENDELALSVIQQ
FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQIFVRDIHKQPVSQSLVRAIVAVAQA
LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
ttgtacaactttctcggatcgcacaacccatactggcgtttgtcggaaaatagtgatgtt
ttacgtttctcctgtaacgaagcaacggaaccagagcgaactctgctgttatctgcggaa
caggctgcacgtatcagggaaatgacggtcatcacgtctggtttgatgatgaacttagtc
gtcgaggagagcgacctctctgttcatctggtaggccgtaagatcaataggcgtgaatgg
gccgggaatgcgtctgcatggcatgacacacctgcggtagcccgcgatttatcgcacgga
ctatcctttgctgaacaagtggtttctgaagcgcattctgcaattgtgattctggacagc
cggggaaatatccaacgttttaatcggttatgcgaagaatataccggactaaaagagcac
gatgtcattggacaaagcgtgtttaaattgtttatgaatcgccgcgaggctgctatctca
cggcgtaacaacagtggttttttccgtagcggcaacgcttatgaagtggaacgctgggta
cagacgcgtaaaggccagcgattgtttctgttccgcaacaaattcgtacatagcggtagc
ggtaaaaatgaaatctatttgatctgctccggcaccgatatcaccgaagagcgtcgtgcc
caggaacgactgcgaattctggctaacaccgatagcatcaccggattgccgaatcgtaac
gcaatgcaggagttgatcgataacgccattaagcaggcggacggcaacaaagttggtgtg
gtttatcttgatttagacaattttaaaaaggtgaatgatgcctacggacacgtgtttggc
gatcagttattacgcgaggtttcactagctattttaagctgccttgagcaggatcaggta
ctggcacgcccaggcggcgatgaatttctgatactcgcgccaaacacctcgcaaagcgcg
ttagaagcgatggcgtcgcgcattttaacccgtcttcgccagcccttcagtattggttta
attgaagtctatactggctgttcagtcggcatttcactttctccgcaacatggtatggat
agtgcagccattattcgccatgccgatacggcaatgtacacggcgaaggaaggtggccgt
gggcagttttgcgttttttctccagaaatgaatcaacgagtatttgaatatctctggctg
gataccaacctgcgtaaagctctggaaaacaatcagttagtcattcactatcaacccaaa
atcacctggcgcggtgaagtacgaagtctggaagcattggtgcgctggcaatcgcccgaa
cgtggattgattccaccgctggactttatttcctacgccgaagagtccgggctaattgtc
cctttaggccgctgggttattcttgatgtcgtacgccaggtggcgaagtggcgggataaa
ggcatcaacctgcgagtagcggtgaacatctctgcgcggcaacttgccgatcaaaccatt
ttcaccgaccttaaacaggtccttcaggaacttaaatttgaatactgccctattgatgtc
gagctaaccgaaagttgtctgattgaaaatgatgaactggcgctgtccgttattcagcaa
tttagccagttaggggcgcaagtacatctggatgatttcggcaccggctactcttcgctt
tctcaactggcgcgcttccctatcgacgccataaaactcgatcagatttttgtccgtgat
attcacaaacagccggtttcgcaatcgctggtacgtgcgatcgttgccgtagcccaggcg
ctgaatcttcaggtgattgcggagggggtagaaagcgcaaaagaagacgcctttttaacc
aaaaatggcatcaatgagaggcaaggtttcttgtttgcaaaaccgatgcccgctgtcgct
tttgaacgctggtataaacgttatctgaaacgtgcataa
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