Escherichia albertii: EAKF1_ch0673c
Help
Entry
EAKF1_ch0673c CDS
T03986
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eal
Escherichia albertii
Pathway
eal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAKF1_ch0673c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eal03019
]
EAKF1_ch0673c
Enzymes [BR:
eal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EAKF1_ch0673c
Messenger RNA biogenesis [BR:
eal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAKF1_ch0673c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AHE58583
LinkDB
All DBs
Position
complement(704208..705569)
Genome browser
AA seq
453 aa
AA seq
DB search
MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK
RQNLLFSATFSDDIKNLAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSYMI
GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGRGQGGGRSQQQPRRAEGGAKSGS
AKPAEKPSRRLGDAKPTGEQQRRRRPRKPAAAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgattctttgggtttaagccctgatatcctgcgcgctgttgccgagcagggt
taccgtgaacccactcctatccagcagcaggcgatccctgcggtgctggaaggccgcgac
ctgatggccagtgcccagaccggcaccggcaaaaccgcgggctttacgctgccgttgttg
caacacctgatcactcgccagccgcacgccaaaggacgtcgcccggtacgcgcgctgatc
ctcaccccgacccgtgaactggcggcgcagattggcgaaaacgtccgtgattacagcaaa
tacctgaacattcgttcgctggtggtgtttggcggcgtcagcattaatccgcagatgatg
aagctgcgtggcggtgttgatgtgctggtggcaacgccgggacgtttgctggacctggaa
caccagaacgcggtgaagctggatcaggttgaaattctcgtcctcgatgaagctgaccgt
atgctcgacatgggctttattcacgacatccgtcgtgtgttgactaaattgccagcgaag
cgccagaacctgctgttctccgccactttctctgacgacattaaaaacctggcggagaag
ctgctgcataatccgctggaaatcgaagtggcgcgccgcaataccgcgtctgatcaggta
acccaacacgttcattttgttgataagaaacgcaaacgcgaattgttgtcgtacatgatt
ggtaaagggaactggcagcaggtgctggtatttacccgtaccaaacatggcgctaaccat
ctggcggaacagctcaataaagatggcatccgcagtgcggcgatccacggtaataaatcg
caaggcgcgcgtacccgtgcgctggccgattttaaatcgggcgatattcgcgtactggtg
gcaactgacattgctgcgcgtggcctggatatcgaagagttgccgcacgtcgtcaactat
gaactgccaaacgtaccggaagattatgtccaccgtattgggcgtaccggtcgtgcagcc
gccactggcgaagcgttatcgctggtgtgcgttgatgaacacaaactgctgcgtgatatc
gaaaaattgctgaaaaaagagatcccgcgcattgcgattccgggctatgagccggatccg
tcaatcaaagctgaaccgatccagaatggtcgccagcaacgtggcggtggtcgtgggcaa
ggcggtggtcgcagtcaacagcaaccgcgccgtgcagaaggtggcgcaaaatcaggtagc
gcgaagcccgcagaaaaaccgtctcgccgcctcggcgatgccaaaccgacaggcgaacaa
caacgtcgtcgccgtccgcgtaaacctgccgctgcgcagtaa
DBGET
integrated database retrieval system
