Escherichia albertii: EAKF1_ch1043
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Entry
EAKF1_ch1043 CDS
T03986
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eal
Escherichia albertii
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eal03400
]
EAKF1_ch1043 (sbcC)
DNA repair and recombination proteins [BR:
eal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAKF1_ch1043 (sbcC)
Archaeal homologous recombinant proteins
EAKF1_ch1043 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_21
ABC_tran
cobW
MobB
NTPase_1
GTP_EFTU
AAA_22
RsgA_GTPase
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AHE58946
LinkDB
All DBs
Position
1101067..1104210
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSTISQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKLARTELEKLQAQANGVALLAPEQVQSLTESLQALTDEEKQLLVAQQ
QEQQSLNWLTRLDELQKETRRRQQTLQQALAEEEKAQPQLAALRLALPARNLRPHWERIA
EHSAALTHTRQQIEEVNTRLQSTMALRANIRHHATRLSAEIQHRQQTLNAWLQENDRFRL
WNNELTGWRAQFSQQASDRAHLRQWQQQLNHAGQKLNALPAISLTLTADEAATAQAQHAE
QRPLRQRLVALHGQIVPQQKRLAQLQAAIQSVTLEQTQRNAALTEMRQRYKEKTQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALELGVNQARLLTLEKEVK
KLGEEGAALRGQLDALTKQLQRDENEAQSIRQDEQALTQQWQAVTDSLNITLQPQDDIQP
WLDAQDEHEQQLRLLSQRHELQAQIAAHNQQITQYQQQIEQRHQQLSATLASYALTLPQE
DEEESWLAARQQEAQSWQQRQNEFSELQNRIQQLTPILDTLPQSDELPHSEENVALENWR
QIHEQCLALQSQCRTLKQQEVLAQQNLEKVQAQFDAALQGSIFADQQEFVAALMDEQKLT
QLEQLKQRLENQRRQAQTLASQVSETLTQHQQQPPAGLDLTLTVEQIQQELVQTNQKLRE
STTRQGEIRQQLKQDADNRQQQQALMQQISLMTQQAEDWGYLNALIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASETLEVEVIDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVDAMK
ERIPVQIKVKKINGLGYSKLDNAFAVK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctcaactcattaaaaggcgaatggaagatt
gatttcacccgtgagccgttcgccagtaacgggctgtttgcgattaccggccctaccggc
gcggggaaaaccacgctgctggatgccatttgtctggcgctgtatcacgagactccgcgc
ctctcaaccatttcacaatcgcaaaatgatctgatgacccgcgataccgccgaatgtctg
gcggaagttgaatttgaagtcaaaggcgaagcgtaccgcgcattctggagccagaatcgg
gcgcgcaaccagccggacggtaatttgcaggtgccgcgcgtagagctggcgcgctgtgca
gacggtaaaatccttgccgataaagtaaaagataagctggaattaacggcgacattaacc
ggactggattacggacgtttcacccgttcgatgctgctttcgcagggccaatttgcagcc
ttcctcaatgccaaaccgaaagagcgcgcggaattgctcgaggagttaacaggcaccgaa
atctacgggcaaatctcggcgatggtctttgaacagcacaaattggcccgtactgagctg
gagaaactgcaagcgcaggccaacggcgtcgcgttgctcgcaccagaacaagtgcaatcg
ctgacagaaagtttgcaggcacttactgacgaagaaaaacagttacttgtcgcgcaacag
caagaacaacaatcactaaactggttaacgcgtctggatgaattacagaaggaaacgcgc
cgtcgtcaacaaacgctgcaacaggcactggcagaggaagaaaaagcgcaaccccaactg
gcagcactccgtctggcactgccagcgcgaaatctccgtccacactgggaacgcatcgca
gaacactctgctgctctgacgcatactcgtcagcagattgaggaagtaaacactcgctta
caaagcacaatggcgcttcgcgcgaacattcgccaccacgcaacacgtttgtcagcagaa
atacaacaccgtcaacaaacgctgaatgcgtggttacaggaaaatgaccgctttcgcctg
tggaacaacgaattgaccggatggcgtgcgcagttctcccaacaggccagcgatcgcgca
catctgcggcaatggcaacagcagttaaaccatgccgggcaaaaacttaatgcgcttccg
gcgatctcgttgactttaaccgctgatgaagctgctaccgcccaggcgcaacatgctgag
caacgcccactgcgtcagcgcctggttgcgctgcacgggcagatagtccctcagcaaaaa
cggctggcgcagctacaagccgctattcagagcgttacgctggaacaaacgcaacgtaac
gctgcgctgacagaaatgcgccaacgttataaagaaaagacgcagcagcttgccgatgtc
aaaaccatttgcgagcaggaagcacgcattaaaacgctggaagcccagcgcgcgcagtta
caggcgggtcagccatgtccgctttgcggttccaccagccacccggcggtcgaggcctat
caggcgctggaactgggggttaatcaggcccgcttactgacgctggaaaaggaagtgaaa
aagctcggcgaagaaggcgcggcgctgcgtgggcaactggatgcattaacaaagcagctt
cagcgcgatgagaacgaagcgcaaagcatccggcaagatgagcaagcgcttactcaacag
tggcaagccgtcacagacagcctgaatatcacgttgcagccgcaggacgatattcaaccg
tggcttgatgcacaagatgaacacgaacaacagttgcgattgctcagccagcgccatgaa
ttgcaggcgcaaattgccgcacataatcagcaaattactcagtatcaacaacaaatagaa
caacgccatcagcaactctctgcaacattagcaagttacgcgctgacattaccgcaggaa
gatgaagaagagagctggttggcagcacgccagcaagaagcgcaaagctggcaacagcgc
cagaatgaattcagcgagctgcaaaaccgtattcagcaactgacgccgattctggacaca
ttaccgcaaagtgatgagttaccacacagtgaagaaaatgtggcgctggaaaactggcgg
caaattcatgaacaatgcctcgcgttacaaagccagtgccggaccttaaagcaacaggaa
gttctggcgcaacaaaacctggaaaaagtccaggcgcagtttgacgctgcgctacagggc
agcatctttgccgaccagcaagagttcgttgcggcactaatggatgaacagaagctgacc
caactggagcaacttaaacaacgtctggaaaaccagcgtcgtcaggcgcaaacgctggca
tctcaggtgtctgaaacgctgacacaacatcagcaacagccgcctgccgggctggatctc
actttaacagtggaacaaatacagcaggagttagtacaaactaaccaaaaattgcgtgaa
agcaccacccgacagggggaaattcgccagcaactgaagcaggatgcagataatcgtcaa
cagcaacaggccctgatgcaacaaatttccctgatgacgcaacaggccgaagactgggga
tatctcaacgcactgatcggctctaaagaaggcgataaattccgtaagttcgcccaggga
ctaacgctggacaatctggtccacctggctaaccagcaacttacccgtctgcacgggcgc
tatctgttacagcgcaaagccagcgagacgctggaagttgaggttatcgatacctggcag
gccgatgcggtacgtgatacccgcaccctttccggcggcgagagttttctcgttagcctg
gcgctggcactagcgctttcggatctggtcagccataaaacgcgtattgactcgctattt
ctcgatgaaggcttcggcacactggatagcgaaacgctggataccgctcttgatgcgctg
gatgcactgaacgccagcggtaaaactatcggcgtgattagccacgttgacgcaatgaaa
gagcgcattccggtacagatcaaagtgaaaaagatcaacggcctgggctacagcaaactg
gacaatgcatttgcggtgaaatag
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integrated database retrieval system
