Escherichia albertii: EAKF1_ch1230c
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Entry
EAKF1_ch1230c CDS
T03986
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eal
Escherichia albertii
Pathway
eal03030
DNA replication
eal03430
Mismatch repair
eal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAKF1_ch1230c (dnaE)
03430 Mismatch repair
EAKF1_ch1230c (dnaE)
03440 Homologous recombination
EAKF1_ch1230c (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eal03032
]
EAKF1_ch1230c (dnaE)
03400 DNA repair and recombination proteins [BR:
eal03400
]
EAKF1_ch1230c (dnaE)
Enzymes [BR:
eal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EAKF1_ch1230c (dnaE)
DNA replication proteins [BR:
eal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EAKF1_ch1230c (dnaE)
DNA repair and recombination proteins [BR:
eal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EAKF1_ch1230c (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AHE59126
LinkDB
All DBs
Position
complement(1294545..1298027)
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFNVQSEPLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDW
LIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEES
YLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRKYSPQQYM
RSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLIKRAKEGL
EERLAFLFPDEEERLKRRPEYDVRLDTELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPDQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRTDARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgtacacctgcgggtgcacagcgactactcgatgatcgatggc
ctggccaaaaccgcgccgctggtaaaaaaggcggcggcgttgggtatgcctgcactggcg
atcaccgatttcaccaacctttgcggtctggtgaagttctacggagcgggacatggcgca
gggattaaacccatcgtcggggcggattttaacgtccagagcgaaccgctgggtgatgag
ttaacccacctgacagtgctggctgcgaacaataccggctatcagaatctgacattgctg
atctcaaaagcgtatcagcgcgggtatggggctgccgggccaatcatcgatcgcgactgg
cttatcgaattaaacgaaggactgatccttctttccggtggacgcatgggcgacgttggt
cgcagccttttgcgtggcaacagtgcgctggtagatgagtgtgtcgccttttatgaagaa
catttcccggatcgttattttctcgaactgattcgcactggcaggccggacgaagaaagc
tatctgcacgcggcggtggaactggcggaagcgcgcggtttgcctgtcgtggcgaccaac
gacgtacgttttatcgacagcagcgactttgacgcacacgaaatccgcgtcgccattcat
gatggatttactctcgacgatcccaaacgcccgcgtaagtattcgccgcagcaatatatg
cgcagcgaagaggagatgtgcgagctgtttgctgacatccccgaagcccttgccaacacc
gttgagattgccaaacgttgtaacgtgaccgtgcgtcttggtgaatacttcctgccgcag
ttcccgaccggggacatgagcaccgaagattatttgatcaaacgtgcaaaagaagggctg
gaagagcgtctggcatttttattccctgacgaggaagaacgtcttaagcggcgcccggaa
tatgacgtacgtctggatactgaactccaggttatcaaccagatggggttccccggctac
ttccttatcgtaatggaatttatccagtggtcgaaggataacggcgtaccggtaggaccg
ggccgtggttcaggtgcggggtcactggtggcctacgcgctaaaaattaccgacctcgat
ccgctggagtttgacctgctgttcgaacgtttccttaaccctgaacgtgtctccatgcct
gactttgacgttgacttctgtatggagaaacgcgaccaggttatcgaacacgtggcggac
atgtacggtcgcgatgcggtatcgcagattatcaccttcggtacgatggcggcaaaagcg
gtgatccgcgacgtaggccgcgtgctggggcatccgtacggctttgttgatcgtatctcg
aagctgatcccgcccgatccggggatgacgctggcgaaagcgtttgaagcagagccgcag
ctgccggaaatctatgaagcggatgaagaagttaaggcgctgatcgacatggcgcgcaaa
ctggaaggggttactcgtaacgccggtaaacatgctggtggggtggttattgcaccgacc
aaaattaccgattttgcgccgctttattgcgatgaagagggtaaacatccggtcacccag
tttgataaaagcgacgttgaatacgccgggttggtgaaatttgacttcctcggcctgcgt
acgctcaccatcatcaactgggcgctggagatgatcaataagcggcgggagaagaatggt
gagccgccgctggatatcgccgcgatcccgctggatgacaagaaaagttttgacatgctg
caacgctcggaaaccaccgcggtattccagcttgaatcgcgcggcatgaaagacctgatc
aagcgtctgcaacctgactgcttcgaagatatgatcgcactggtggcgctgttccgcccc
ggcccgttgcaatcagggatggtggataactttatcgaccgtaaacatggtcgtgaagag
atttcctatccagacgtgcagtggcagcatgaaagtctgaaaccggtactggagccgact
tacggcattatcctgtatcaggaacaggtcatgcagattgcccaggtgctttctggctat
accctcggcggtgcagatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgttctgtatttgctgaaggtgcggaaaagaacgggatcaacgctgaactg
gcgatgaaaatcttcgatcttgtggagaaattcgccggttacggatttaacaaatcgcac
tctgcggcctatgctttggtgtcatatcaaacgttatggctgaaagcgcactacccggca
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaggtggtgggtctg
gtggatgagtgctggcggatggggctgaaaatcctgccgccagatataaactcgggtctt
taccatttccacgtcaacgatgacggcgaaatcgtgtatggtattggcgccatcaaaggg
gtgggggaaggcccgattgaggccatcattgaagcccgtaataaaggcggctacttccgc
gaactgtttgatctctgcgcccgaaccgacactaaaaagctgaaccggcgagtgctggaa
aagctaatcatgtccggggcgtttgaccgcttggggccgcaccgcgccgcgttgatgaac
tcgctgggcgatgcgttaaaagcggctgatcaacacgcgaaagcggaagccatcggtcag
gccgatatgtttggcgtgctggcggaagagccggagcaaattgagcaatcctacgccagc
tgccagccgtggccggatcaggtggtgctggatggggagcgcgaaacgttgggtttgtac
ctgacgggacaccctatcaaccagtatttaaaagagattgagcgttatgtcggaggcgta
aggctgaaagacatgcacccgacagaacgtggtaaagtcaccacggccgccgggcttgtt
gttgctgcgcgggttatggtcaccaagcgcggtaatcgtatcggtatctgcacgctggat
gaccgttccgggcgcctcgaagtgatgttgtttactgacgccctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgaccgctcgcgaagtgatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctctgggacaattccagtacatctctactatcag
aggacggatgcacgtgcgcggttgcgttttggcgcgacgtggcgtgtctctccgagtgat
cgtttattaaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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