Escherichia albertii: EAKF1_ch1270
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Entry
EAKF1_ch1270 CDS
T03986
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
eal
Escherichia albertii
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eal03016
]
EAKF1_ch1270 (ligT)
Enzymes [BR:
eal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EAKF1_ch1270 (ligT)
Transfer RNA biogenesis [BR:
eal03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EAKF1_ch1270 (ligT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHE59166
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All DBs
Position
1346109..1346639
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AA seq
176 aa
AA seq
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MSEPQRLFFAIDLPAEVREQIIHWRAAQFPPDAGRPVAAENLHLTLAFLGEVSAEKEKAL
SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR
PFHPHITLLRDASEAVTIPPPGFNWSYTVTEFTLYASSFARGRTRYTPLKRWTLAQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgcaacggctattctttgctatcgatttacctgctgaagtccgcgagcaa
ataatccactggcgcgccgcacagtttccgccagacgcagggcgtccggttgccgccgag
aatttgcatctgacgttggcgtttttaggcgaggtgagcgcagagaaagagaaagcgctg
tcgttactggccggacggatccgtcaaccgggttttacattaacgctggatgatgcaggc
caatggttgcgttcacgcgtggtgtggttgggcatgcgccagccgccgcgcggcttaata
caactggcgaatatgctccgttcgcaagcagcacgcagtggttgttttcaaagcaatcgc
ccttttcatccacatatcaccttattgcgcgatgccagcgaagcggtgaccattccgccg
ccaggctttaactggtcgtatacggtgacagagttcaccctttatgcctcctcgtttgct
cgtgggcgcacacgctacacgccgctaaaacgctggactctggcgcaataa
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