Escherichia albertii: EAKF1_ch2118c
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Entry
EAKF1_ch2118c CDS
T03986
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eal
Escherichia albertii
Pathway
eal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAKF1_ch2118c (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eal03019
]
EAKF1_ch2118c (recQ)
03400 DNA repair and recombination proteins [BR:
eal03400
]
EAKF1_ch2118c (recQ)
Enzymes [BR:
eal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAKF1_ch2118c (recQ)
Messenger RNA biogenesis [BR:
eal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAKF1_ch2118c (recQ)
DNA repair and recombination proteins [BR:
eal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAKF1_ch2118c (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AHE59992
LinkDB
All DBs
Position
complement(2240753..2242588)
Genome browser
AA seq
611 aa
AA seq
DB search
MNVAQAEVLNLEFGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ
IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRL
LYIAPERLMLDNFLEHLAHWNPALLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM
ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS
GIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGM
GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG
QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDASTDAQI
ALSTIGRVNQRFGMGYVVEVIRGANNQRIREFGHDKLKVYGMGRDKSHEHWVSVIRQLIH
LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKVMQKSFGGNYDRKLFAK
LRKLRKAIADEENIPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMTL
IRAHVDGDDEE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtggcgcaggcggaagtgttgaatctggagttcggagctaaacaggttttacaa
gaaacctttggctaccaacagtttcgccctggtcaggaagaaattatcgacaccgtgctt
tctggtcgcgattgccttgtcgtcatgcctactggcggcggcaaatccctttgctatcaa
atccctgccttattgctaaacggccttactgtggttgtttcaccgctgatttcgttgatg
aaagatcaggtggatcagctacaggccaacggcgtggcggcagcatgccttaactcgacg
caaacccgcgagcagcagcttgaagtgatgacgggctgtcgcaccgggcaaattcgtctg
ctgtatatcgccccggaacgcctgatgctggataactttcttgagcatctggcgcactgg
aacccggcgttattagctgttgatgaagcacactgtatctcccagtggggccatgatttc
cgcccggaatacgccgcgctcggtcagttgcgccaacgcttcccgacactgccgtttatg
gcgctgaccgctactgccgacgacaccacgcgccaggatatcgtgcgtctgctggggtta
aacgatccgctgatccaaatcagcagttttgaccgcccgaatattcgctacatgctgatg
gagaaattcaaaccgcttgatcagttaatgcgttatgtgcaggaacaacgcggtaagtcg
ggcattatttactgcaacagccgggcgaaagtggaagacaccgccgcgcgcttgcaaagt
cggggtattagcgcagcggcttatcatgcagggctggaaaatgatgtccgtgccgatgtg
caggaaaaatttcagcgcgatgacctgcaaatagtggtggcgaccgtggcgtttggcatg
ggcattaataaacctaacgtccgcttcgtggtgcattttgatattccgcgcaatatcgaa
tcctattatcaggaaaccgggcgcgccgggcgtgatggcctgccagcagaagcgatgctg
ttttacgatccggcagatatggcgtggctgcgccgttgcctggaagagaagccgcaaggg
caattgcaggatattgaacggcataaactcaatgcgatgggcgcctttgccgaggcgcaa
acctgccgccgtctggtgctgttgaactattttggcgaaggtcgccaggaaccgtgcggt
aactgcgatatctgcctcgatccgccgaagcagtatgatgcttcgactgatgcgcaaatc
gcgctttctaccataggtcgcgtcaaccagcgttttggtatgggctatgtagtagaagtg
attcgtggcgctaataaccagcgtatccgcgaatttggtcacgacaaactcaaggtttac
ggcatgggccgggacaaaagccatgaacactgggtaagcgtgattcgtcaattgattcat
ctcggtttggtgacgcaaaatatcgcccagcattctgcattacaactgacagaagccgca
cgcccggtgctgcgtggcgagtcttctttgcaactcgctgtgccgcgaattgtggcgctc
aaaccgaaagtgatgcagaaatcgttcggcggtaattatgaccgcaaactgttcgccaaa
ttacgcaagctgcgtaaagccatcgccgatgaagaaaatatcccgccatatgtggtgttt
aatgacgctaccttgattgagatggcggaacagatgccgatcaccgccagcgaaatgttg
agcgtcaacggtgttgggatgcgcaagctggaacggtttggtaaaccgtttatgacgctt
atccgcgcgcatgtcgacggtgatgacgaagagtag
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