Escherichia albertii: EAKF1_ch2126c
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Entry
EAKF1_ch2126c CDS
T03986
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eal
Escherichia albertii
Pathway
eal03420
Nucleotide excision repair
eal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EAKF1_ch2126c (uvrD)
03430 Mismatch repair
EAKF1_ch2126c (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eal03400
]
EAKF1_ch2126c (uvrD)
Enzymes [BR:
eal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAKF1_ch2126c (uvrD)
DNA repair and recombination proteins [BR:
eal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAKF1_ch2126c (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EAKF1_ch2126c (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHE60000
LinkDB
All DBs
Position
complement(2248256..2250460)
Genome browser
AA seq
734 aa
AA seq
DB search
MTLLRPTYFYAAVLMDVSYLLDSLNDKQREAVAAPRSNILVLAGAGSGKTRVLVHRIAWL
MSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDAN
LPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV
EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTN
NIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRST
SNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA
LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAA
FERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELID
ALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE
DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL
DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL
RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG
IKWLVAAYARLETV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcttcttcgcccaacctatttttacgcggcggtgctaatggacgtttcttacctg
ctcgatagccttaatgacaaacagcgcgaagcggtggccgcgccacgcagcaacattctg
gtgctggcgggggcgggcagtggtaagacgcgcgtactggtgcatcgtatcgcctggctg
atgagtgtggaaaactgttcaccatactcgattatggcggtgacgtttaccaacaaagcc
gcggcggaaatgcgccatcgtatcgggcaactgatgggcaccagccagggcggcatgtgg
gtaggcacctttcacgggctggcacaccgcctgctgcgtgcgcaccatatggacgccaat
ctgccgcaggatttccagatcctcgatagcgaggaccagctgcgtctgcttaagcgtctg
atcaaggcgatgaatctcgacgaaaagcaatggccgccgcgccaggcaatgtggtacatc
aacagccagaaagatgaagggctgcgtccgcatcatattcaaagctacggtaatccggtg
gagcaaacctggcagaaggtgtatcaggcgtatcaggaagcgtgcgaccgcgcgggcctg
gtggactttgccgaactgctgctgcgcgctcacgaactgtggcttaacaagccgcatatc
ctgcaacactatcgtgaacgttttaccaatatcctggtagacgaattccaggataccaac
aacattcagtacgcgtggatccgcctgctggcgggcgataccggcaaagtaatgattgtt
ggcgatgacgaccagtcaatctacggatggcgcggtgcgcaggtggagaatattcagcgt
ttcctcaatgatttccccggtgccgaaactattcgtctggagcagaactatcgttccacc
agcaacattctgagcgccgcgaacgccctgattgaaaacaacaacgggcgcttaggtaaa
aaactgtggaccgatggcgcggacggtgagccgatttctctctattgcgcctttaatgaa
ctcgacgaagcgcgttttgtggttaatcgcatcaaaacctggcaggacaacggcggggcg
ctcgccgagtgcgccattctctaccgcagcaacgctcagtcgcgtgtactggaagaggcg
ctgctacaggcgagtatgccgtaccgtatttacggcgggatgcgcttcttcgagcgtcag
gaaatcaaagatgcgctctcgtatctgcgcctgattgccaatcgcaacgacgacgcggcg
tttgagcgcgtggtcaatacgccaacgcggggtattggtgaccggacgctggacgtggtg
cgtcagacatcgcgcgatcgccagttaactctctggcaggcatgtcgtgaactgttgcag
gaaaaagcgctcgccggacgtgcagccagcgccttacagcgttttatggagctgatcgac
gccttagcgcaggaaactgccgatatgccgctgcatgtacagactgaccgggtaattaaa
gactccggcctgcgcaccatgtacgagcaggagaaaggcgaaaaaggccagacgcgtatc
gaaaacttagaggagctggtgacggcgacgcgtcagttcagctacaacgaagaagacgaa
gatttaatgccgttgcaggcattcctttctcacgcggcgctggaagcgggtgaagggcag
gcagatacctggcaggacgcggtacagttgatgacgctacactcggcgaaaggtctggag
ttcccgcaggtgtttatcgtcggtatggaagagggcatgttcccaagccaaatgtcgctg
gatgaaggcgggcgtctggaagaagaacgccgtctggcctacgttggcgtaacccgcgcg
atgcagaaactgacgctgacctacgcggaaacccgccgtctgtatggcaaagaggtttac
catcgcccgtcgcgctttatcggtgagctgccggaagagtgtgtggaagaggtgcgttta
cgcgctacggtaagccgcccggtcagccatcagcgtatgggtacgccgatggttgagaac
gacagcggttacaaactcggccagcgcgtgcgccacgccaagtttggcgaagggactatc
gtcaatatggaaggcagcggcgaacatagccgtttgcaggtggcattccagggccagggg
attaaatggctggtggcggcttacgcccgtctggagacggtgtaa
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