Escherichia albertii: EAKF1_ch2774
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Entry
EAKF1_ch2774 CDS
T03986
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eal
Escherichia albertii
Pathway
eal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAKF1_ch2774 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eal03019
]
EAKF1_ch2774 (deaD)
03009 Ribosome biogenesis [BR:
eal03009
]
EAKF1_ch2774 (deaD)
Enzymes [BR:
eal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EAKF1_ch2774 (deaD)
Messenger RNA biogenesis [BR:
eal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAKF1_ch2774 (deaD)
Ribosome biogenesis [BR:
eal03009
]
Prokaryotic type
rRNA helicases
EAKF1_ch2774 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
AHE60641
LinkDB
All DBs
Position
2923517..2925400
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AA seq
627 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLSKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELD
LETLAAALLKMAQGERTLIVPPDAPMRPRREFRDRDDRGPRDRNDRGPRGDREDRPRRER
RDVGEMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE
VLQHFTRTRILNKPMNMQLLGDAQPHTERRGGGRGFGGERREGGRNFSGERREGGRGDGR
RFSGERREGRAPRRDDSTGRRRFGGDA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccaattcaggcggagtgtattccacatctg
ctgaatggccgcgacgttctgggtatggcccagacggggagcggaaaaactgcagcattc
tccttacctttgctgcaaaatcttgatcctgagctgaaagcgccacagattctggtgctg
gcaccgacccgcgaactggcggtacaggttgctgaagcaatgacggatttctctaaacac
atgcgcggcgtaaacgtggttgctctgtacggcggccagcgttatgacgtgcaattacgt
gccctgcgtcaggggccgcagatcgttgtcggtactccaggccgtctgctggaccacctg
aaacgtggcactctggacctctctaaactgagcggtctggttctggatgaagctgatgaa
atgctgcgtatgggcttcatcgaagacgtggaaaccattatggcgcagatcccggaaggt
catcagaccgctctattctctgcaaccatgccggaagcgatccgtcgcattacccgtcgc
tttatgaaagagccgcaggaagtgcgtattcagtccagcgtgacgacccgtcctgacatc
agccagagctactggactgtctggggtatgcgtaaaaatgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattattttcgttcgtaccaaaaacgcgactctggaa
gtggctgaagccctggaacgtaacggctataacagcgccgcgctgaacggtgatatgaac
caggcgctgcgtgagcagactctggaacgtctgaaagatggtcgtctggacatcctgatc
gccaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtggttaactac
gatatcccgatggactccgagtcttacgttcaccgtatcggtcgtaccggtcgtgcgggt
cgtgcgggtcgtgcgctgctgttcgttgaaaaccgcgagcgtcgtctgctgcgcaacatc
gagcgcaccatgaagctgaccattccagaagtcgaactgcctaacgcagaactgctgagc
aaacgccgtctggaaaaatttgctgccaaagtacagcagcaactggaaagtagcgatctg
gatcaataccgtgcactgttgagcaaaattcagccgactgcggaaggtgaagagttggat
ctcgaaactctggcagccgcactgctgaaaatggcacagggtgaacgaactctgatcgtg
ccgccagatgcgccgatgcgtccgcgtcgtgaattccgtgaccgtgatgaccgtggtccg
cgcgatcgtaatgaccgtggcccgcgtggcgaccgtgaagatcgtccgcgtcgtgaacgt
cgcgatgttggtgaaatgcagctttaccgcattgaagtgggccgtgatgatggcgttgaa
gttcgtcatatcgttggtgcaattgccaacgaaggcgatattagcagccgttatatcggt
aacatcaagctgtttgcttctcactccactatcgaactgccgaaggggatgccaggtgaa
gtgctgcaacactttacccgtactcgcatccttaacaaaccaatgaacatgcaactgttg
ggtgatgcacagccgcatactgaacgtcgtggcggtggtcgtggcttcggtggtgagcgt
cgtgagggcggtcgtaatttcagcggtgaacgccgtgaaggggggcgtggtgatggtcgt
cgtttcagcggcgaacgtcgtgaaggccgcgcaccgcgtcgtgatgactctaccggtcgc
cgtcgtttcggtggcgatgcgtaa
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