Escherichia albertii: EAKF1_ch3248
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Entry
EAKF1_ch3248 CDS
T03986
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
eal
Escherichia albertii
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eal03016
]
EAKF1_ch3248 (truD)
Enzymes [BR:
eal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EAKF1_ch3248 (truD)
Transfer RNA biogenesis [BR:
eal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EAKF1_ch3248 (truD)
Prokaryotic type
EAKF1_ch3248 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHE61098
LinkDB
All DBs
Position
3419055..3420104
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AA seq
349 aa
AA seq
DB search
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRK
LRLGALKGNSFTLVLRDISNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQ
THTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATSEE
LAELQRRVNEKELMITAALPGSGEWGTQREALAFEQAAVAEETELQSLLLREKVEAARRA
MLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgataatctcacttaccttcacggtaaaccacaaggcaccgggctgctg
aaagctaacccggaagattttgtggtggtggaagatttaggttttgagcctgatggcgaa
ggtgagcatattctggtgcggatcctcaaaaatggctgcaatacccgttttgtggcggac
gcactggcgaaattcctgaaaatccatgctcgtgaagtcagttttgccgggcagaaagac
aaacatgcagttacggaacagtggttatgcgcccgcgtgccgggtaaagagatgcccgat
ttgagcgctttccaactggaaggttgccaggtgctggagtatgcgcggcacaagcgtaag
ctgcggttaggggcgctgaaaggcaattcatttaccctggtattgcgtgacataagcaat
cgtgatgacgttgaacagcgcctgatcgatatttgtgttaaaggggtgcctaattatttt
ggcgcgcaacgttttggtatcggcggtagcaacctgcagggggcgttacgttgggcgcaa
acccatactccggtgcgcgatcgtaataaacggagtttttggttgtcggctgcccgtagc
gctttgtttaatcagattgtcgctgagcgcctcaaaaaagcggacgttaatcaagttgtt
gacggcgatgcgctacaattagccgggcgcggtagttggtttgtcgcaacaagtgaagaa
ctggcggaactacagcgtcgcgtcaatgaaaaagagctgatgattaccgctgcattgcct
ggtagcggcgagtggggaactcaacgcgaggcactggcattcgaacaagcggctgttgct
gaagaaaccgaattgcagtcgttattgttgcgtgaaaaagttgaagccgcgcgcagagcg
atgttgctatatccgcaacaattaagctggaactggtgggatgacgtcaccgtcgaaatc
cgtttctggcttccggcgggaagttttgcgaccagcgttgtcagggaacttatcaacaca
acaggtgattatgcgcatattgctgagtaa
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