Entry |
|
Symbol |
srmB
|
Name |
(GenBank) ATP-dependent RNA helicase SrmB
|
KO |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:eal00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:eal03009]
EAKF1_ch3425c (srmB)
Enzymes [BR:eal01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EAKF1_ch3425c (srmB)
Ribosome biogenesis [BR:eal03009]
Prokaryotic type
rRNA helicases
EAKF1_ch3425c (srmB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3590492..3591826)
|
AA seq |
444 aa
MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL
GKVGRYIEEPIKARVIDELRPKTRAPSEKQSGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTAEE |
NT seq |
1335 nt +upstreamnt +downstreamnt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccacgtaagaaatccggtccgccgcgtatttta
atccttaccccgactcgcgaactggcgatgcaggtggccgatcatgcccgcgaactggcg
aaacatacgcatcttgatatcgccactatcaccggcggcgtggcctatatgaaccatgcg
gaagtgttcagcgaaaatcaggatatcgtggtcgctacgacaggccgccttctgcaatat
ataaaagaagaaaacttcgattgccgcgcagttgaaacgctgatcctcgacgaagcggac
cgtatgctggatatgggcttcgcccaggacatcgagcacattgctggcgaaacccgctgg
cgtaaacagaccctgctcttctcagcaacgctggaaggcgacgctattcaggattttgct
gaacgtctactggaagatccagtggaagtttctgccaatccatccacccgtgagcgcaaa
aaaattcatcagtggtattaccgtgctgatgatcttgaacataaaaccgcgctgctggtg
catctgttaaaacagccggaagcaactcgctcaatcgtatttgtgcgtaagcgtgagcgg
gtgcatgaactggcaaactggctgcgcgaagcgggtatcaacaactgctatctcgaaggc
gagatggtacaaggcaagcgtaacgaagcgatcaagcgtctgaccgaaggtcgcgtaaat
gtacttgttgcgactgacgttgccgcacgtggtatcgatattcctgatgtcagccacgta
tttaacttcgatatgccgcgcagtggcgatacctatctacaccgcatcggacgtaccgct
cgcgccggtcgtaaaggaacggcgatttcgctggttgaagctcatgaccatctgctgctg
ggcaaagtaggccgctatattgaagagccgattaaagctcgtgtaattgatgagttacgg
ccaaaaactcgcgcgccaagcgagaaacagagcggcaagccatcgaagaaagtgttggcg
aagcgtgccgagaagaaaaaggctaaagagaaagagaagccgcgggtgaaaaaacgccat
cgcgataccaaaaatattggtaaacgccgcaaaccaagcggaacaggcgtaccgccgcaa
acggcagaagagtaa |