KEGG   Escherichia albertii: EAKF1_ch3425c
Entry
EAKF1_ch3425c     CDS       T03986                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
eal  Escherichia albertii
Brite
KEGG Orthology (KO) [BR:eal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eal03009]
    EAKF1_ch3425c (srmB)
Enzymes [BR:eal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EAKF1_ch3425c (srmB)
Ribosome biogenesis [BR:eal03009]
 Prokaryotic type
  rRNA helicases
   EAKF1_ch3425c (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 CMS1 Cas3-like_C_2
Other DBs
NCBI-ProteinID: AHE61270
LinkDB
Position
complement(3590492..3591826)
AA seq 444 aa
MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL
GKVGRYIEEPIKARVIDELRPKTRAPSEKQSGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTAEE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccacgtaagaaatccggtccgccgcgtatttta
atccttaccccgactcgcgaactggcgatgcaggtggccgatcatgcccgcgaactggcg
aaacatacgcatcttgatatcgccactatcaccggcggcgtggcctatatgaaccatgcg
gaagtgttcagcgaaaatcaggatatcgtggtcgctacgacaggccgccttctgcaatat
ataaaagaagaaaacttcgattgccgcgcagttgaaacgctgatcctcgacgaagcggac
cgtatgctggatatgggcttcgcccaggacatcgagcacattgctggcgaaacccgctgg
cgtaaacagaccctgctcttctcagcaacgctggaaggcgacgctattcaggattttgct
gaacgtctactggaagatccagtggaagtttctgccaatccatccacccgtgagcgcaaa
aaaattcatcagtggtattaccgtgctgatgatcttgaacataaaaccgcgctgctggtg
catctgttaaaacagccggaagcaactcgctcaatcgtatttgtgcgtaagcgtgagcgg
gtgcatgaactggcaaactggctgcgcgaagcgggtatcaacaactgctatctcgaaggc
gagatggtacaaggcaagcgtaacgaagcgatcaagcgtctgaccgaaggtcgcgtaaat
gtacttgttgcgactgacgttgccgcacgtggtatcgatattcctgatgtcagccacgta
tttaacttcgatatgccgcgcagtggcgatacctatctacaccgcatcggacgtaccgct
cgcgccggtcgtaaaggaacggcgatttcgctggttgaagctcatgaccatctgctgctg
ggcaaagtaggccgctatattgaagagccgattaaagctcgtgtaattgatgagttacgg
ccaaaaactcgcgcgccaagcgagaaacagagcggcaagccatcgaagaaagtgttggcg
aagcgtgccgagaagaaaaaggctaaagagaaagagaagccgcgggtgaaaaaacgccat
cgcgataccaaaaatattggtaaacgccgcaaaccaagcggaacaggcgtaccgccgcaa
acggcagaagagtaa

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