Escherichia albertii: EAKF1_ch4000c
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Entry
EAKF1_ch4000c CDS
T03986
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
eal
Escherichia albertii
Pathway
eal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EAKF1_ch4000c (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eal03400
]
EAKF1_ch4000c (sbcB)
Enzymes [BR:
eal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EAKF1_ch4000c (sbcB)
DNA repair and recombination proteins [BR:
eal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EAKF1_ch4000c (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAKF1_ch4000c (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAKF1_ch4000c (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHE61824
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All DBs
Position
complement(4210956..4212383)
Genome browser
AA seq
475 aa
AA seq
DB search
MMNNGKHQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEIFYCKPADDYLPQ
PDAVLITGITPQEARAKGENEAAFATRIHSLFTVPNTCILGYNNVRFDDEVTRNIFYRNF
YDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEEGLPSFRLEHLTKANGIEHSNA
HDAMADVYATIAMAKLVKTRQPRLFDYLYTHRNKHKLMALIDVPQMKPLVHVSGMFGAWR
GNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNAAVPVKL
VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFAEAEPFTPS
ENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLRFNYRARNFPGTLD
YAEQQRWLEHRRQVFTPEFLQSYADELQMLAQQYADDKEKVALLKALWQYAEEIV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataacggcaaacatcaacctacttttttgttccacgattacgaaacttttggc
acgcatccggcgctggatcgccctgcgcagtttgccgctattcgcaccgatagtgaattt
aacgtaataggcgaaccggaaattttttactgcaaaccggcagatgactacttaccccag
ccagacgcggtattgattacaggaattacaccacaagaagcgcgggcgaaaggtgaaaat
gaagccgcctttgctacacggatccactcactttttaccgtgccgaatacctgtatcctg
ggttacaacaatgtgcgtttcgacgacgaagtcacacgtaacatcttttaccgtaatttc
tatgatccttatgcctggagctggcagcatgataactctcgctgggatctgctggatgtc
atgcgcgcctgttatgctctgcgcccggagggaataaactggccagaaaatgaagagggt
ttgccgagtttccgccttgaacatttaaccaaagccaacggcattgaacatagtaatgcc
cacgatgcgatggctgacgtgtacgccactattgccatggcgaagctggtaaaaacacgt
cagccacgtctgtttgattatctctacacccatcgtaataagcacaaactgatggcgctg
attgatgttccgcagatgaaacctctggtgcacgtttctggtatgtttggcgcatggcgc
ggtaataccagttgggtggcgccgctggcgtggcacccggaaaatcgtaatgcggtgatt
atggttgatctggcaggtgatatttcgccgttactggagctggacagcgacaccctgcgc
gaacgcctgtataccgccaaagccgatctgggcgataacgccgccgttccggtgaaactg
gtgcatatcaataaatgtccggtactggcgcaagcgaatacactacgcccggaagatgcc
gatcgactgggaattaatcgccagcattgcctcgataacctgaaaattttgcgtgaaaat
ccgcaagtgcgcgaaaaagtagtggcgatattcgctgaagcagaaccgtttacgccttca
gagaatgttgatgcccagctttataatggctttttcagcgatgccgatcgcgcggcgatg
aaaattgtgctggaaactgagccacgtaatttaccggcgctggatatcacctttgtcgac
aaacgaattgaaaagctgcggtttaactatcgggcgcgcaacttcccggggacgctggat
tacgccgaacagcaacgctggctggaacatcgtcgccaggtattcactcccgagtttttg
caaagttatgctgatgaactgcagatgctggcgcagcaatacgccgacgataaagaaaaa
gtggcgctgttaaaggcgctttggcagtacgcggaagagattgtctga
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