Escherichia albertii: EAKF1_ch4247
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Entry
EAKF1_ch4247 CDS
T03986
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eal
Escherichia albertii
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eal03016
]
EAKF1_ch4247 (rnd)
Enzymes [BR:
eal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EAKF1_ch4247 (rnd)
Transfer RNA biogenesis [BR:
eal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EAKF1_ch4247 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHE62061
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All DBs
Position
4425407..4426522
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AA seq
371 aa
AA seq
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MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWS
PLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGHPMSWGFASMVEE
YSGVTLDKSESRTDWLARPLTERQCEYAAADVRYLLPITTKLMAETEASGWLPAALDECR
LMQIRRQEVLAPEEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHL
WSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQALPEDALPQPMLNLMDMPGYR
KVFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE
ALHNLLQEYPQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgattaccacggacgatgcgctggcttctttgtgtgaagctgtccgtgcctttccggcg
atagccctggatactgaatttgttcgtacgcgcacttattacccacaattgggtttgatt
caactttttgatggcgaacatctcgcgctgatcgatccacttgggatcactgactggtcg
ccgctgaaggcgatactgcgtgatccgtccatcaccaaattcctccatgcgggcagtgag
gatctggaggtcttcctcaacgtttttggtgagttacctcaacctcttattgatacccaa
atcctcgcggctttctgcggtcatccgatgtcatggggctttgcttccatggtggaagag
tattctggcgttacgctggataagagcgaatcgcgcaccgactggctggccagaccattg
acggaacgtcagtgtgaatatgcggcggcggacgtccggtatttattaccgatcaccaca
aagctgatggctgaaaccgaagcctctggctggctccctgccgcactggatgaatgccgc
ctgatgcaaatccgtcgtcaggaagtgctggcgccggaagaggcatggcgtgatatcacg
aatgcctggcagttgcgtacgcgccaactggcgtgtctgcaattgttagcggactggcgt
ctgcgcaaggcgcgggagcgcgatctggcggtaaattttgtcgttcgcgaagaacatctg
tggtcggtagcgcgctatatgccgggcagtttgggcgaactggatagtctgggcttatcc
ggtagcgaaatccgtttccacggtaaaacgctgctggcgctggtggagaaagcacaggca
ttgcctgaagacgcattaccgcagccgatgcttaatctgatggatatgcctggttatcgt
aaggtgtttaaggcgattaaatcgttgattactgatgtgagcgaaacgcacaagattagc
gctgaattgctggcatcgcgccgacagataaatcagttgctgaactggcactggaagtta
aaaccgcagaataatttgccggagctgatttccggctggcgtggtgaactgatggcggaa
gcattacacaacttattgcaggaatatccgcagtaa
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