Erwinia amylovora CFBP1430: EAMY_0168
Help
Entry
EAMY_0168 CDS
T01197
Symbol
rhlB
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAMY_0168 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eam03019
]
EAMY_0168 (rhlB)
Enzymes [BR:
eam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EAMY_0168 (rhlB)
Messenger RNA biogenesis [BR:
eam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAMY_0168 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
CBA19110
UniProt:
D4HUI7
LinkDB
All DBs
Position
complement(200180..201472)
Genome browser
AA seq
430 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPQVIEALETKGFHNCTPIQALALPFTLSGRDVAGQAQTGTGKT
MAFLTSTFHHLLSHPAPEGRQVNQPRALILAPTRELAVQIHADAEPLAQITGLKLGLAYG
GDGYDKQLKVLESGVDVLIGTTGRLIDYAKQNHVNLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPAASQRLNMLFSATLSFRVRELAFENMNNAEYVEVEPDQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRTIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGDVDILVATDVAARGLHIPAVTHVFNYDLPDDREDYVHRIGRTGRAGANGHSISLA
CEEYALNLTAIEEYIGHSIPVSRYNSDALMGDLPPPKRLTRNRSGNGPRRGGNNNRRSSA
PRGPNRKRSG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacagaacagaagttttccgacttcgccctgcaccctcaggtg
attgaagcccttgaaactaaagggtttcataattgcacgcctattcaggcgctggcatta
ccgtttacgctctccgggcgtgatgtagcaggtcaggcgcaaacaggtaccggcaaaacg
atggcgtttctgacgtcaacgttccatcatcttctttctcaccctgctccggaaggccgt
caggttaaccagccccgcgcactcatccttgccccaacgcgcgaactggcggtacaaatc
catgcagacgccgaaccgctggcgcagataacgggcctgaagctcggccttgcctatggc
ggcgacggttatgacaaacagctaaaagtgctggaaagcggtgtcgatgtactgatcggc
accaccggccgtttaatcgattacgctaaacaaaatcacgtcaatttgggcgccattcag
gtcgtggtactcgacgaagccgatcgtatgttcgaccttggcttcatcaaagatattcgc
tggttattccgtcgcatgccagccgccagtcaacgcctgaacatgctgttctctgccacc
ctgtcattccgcgtacgagaactggcgtttgagaacatgaacaatgccgaatacgttgaa
gtcgagccggaccagaaaaccgggcatcgtattaaagaagaattgttctatccttccaac
gaagaaaaaatgcgtttgctgcaaacgctgattgaagaagagtggccggatcgcaccatc
attttcgccaataccaagcatcgttgcgaagatatctggggccatctggctgccgatggc
catcgcgtcggcctgctgaccggcgacgtggcgcagaaaaagcgcctgcgcatccttgat
gacttcaccaaaggtgatgtcgatatcctcgtggctactgacgttgccgcgcgtggtctg
cacattcccgccgtgactcacgtctttaactacgacttgcctgacgaccgtgaagattac
gtacaccgtattggtcgcaccgggcgtgcgggcgctaacgggcattcaatcagcctggcc
tgtgaagagtacgcgctgaatctgacggccatcgaagagtacatcggccacagcatcccg
gttagtcggtataacagcgatgcgctaatgggcgatctcccgccgcctaagcgtttaacc
cgcaaccgttcagggaatggtccgcgccgtggcggtaacaacaaccgccgcagcagtgca
ccacgtggccctaaccgtaaacgttcaggttaa
DBGET
integrated database retrieval system
