Erwinia amylovora CFBP1430: EAMY_0198
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Entry
EAMY_0198 CDS
T01197
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAMY_0198 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eam03019
]
EAMY_0198 (recQ)
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_0198 (recQ)
Enzymes [BR:
eam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAMY_0198 (recQ)
Messenger RNA biogenesis [BR:
eam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAMY_0198 (recQ)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAMY_0198 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CBA19140
UniProt:
D4HUL7
LinkDB
All DBs
Position
234707..236539
Genome browser
AA seq
610 aa
AA seq
DB search
MSTAAVINNEALADQVLRDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIP
ALVRQGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSGKVRLLY
IAPERLMMDNFLEQLTHCNPAMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMAL
TATADETTRNDIARLLQLNDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNAHRAQVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLEEKKQGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQACDNCDICLDPPRRYDGLVEAQKAL
SCIYRVGQRFGMGYIVEILRGANNQRIRDMQHDKLPVYGIGRDQNHEHWTSVLRQLIHLG
LVTQNIAMYSALQLTEAARPVLRGEVSLLLAVPRLVSVKTRGSSQKSFGGNYDRKLFAKL
RKLRKAIADEDNLPPYVVFNDATLIEMAEQMPITASEMLSVNGVGHKKLERFGKPFLLMI
KEHIDGGDDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcagcagtcatcaataacgaagcgctggcagaccaggtattgcgtgatacc
ttcggctatcagcagtttcgcccgggacaacaaaccatcatccaggaatcgctgaacggg
cgtgactgcctggtggtgatgccaaccggtgggggcaaatcgctctgctatcaaattccg
gcgctggtgcgtcagggactgacgctggtggtgtcaccgctgatctcgctgatgaaagac
caggtcgatcagctgctggccaacggggtagcggcggcctgtctcaattcgacgcaaaat
cgtgaagaacagcagaacgtgatggcaggctgccgcagcggaaaagtgcgtttgctctac
attgctcctgaacgcctgatgatggacaacttccttgagcagctgacgcactgcaacccg
gcgatgctggcggtggatgaagcccactgtatctcgcagtggggccatgatttccgcccg
gaatatggcgctttgggccagctgcgtcagcggctgcctgacgtcccggtgatggcgtta
acggcgacagcggatgagaccacccgcaacgatattgcccgcctgttacagcttaatgac
ccgctgatccagatcagcagtttcgaccggccgaatattcgctacacgctggtggagaaa
tttaagccgaccgaacagctgctgcgctacgttcaggaccagcgcggcaagtgtggcatt
atttactgcaacagccgggcgaaagttgaagataccgctgcccgcctgcaaagccgtggt
ttgagcgtcggggcttatcacgccggaatggataacgcgcaccgcgcccaggtgcaggaa
gcctttcagcgcgacgacctgcaaattgtggtggcgacggtggcatttgggatgggcatc
aacaaacccaacgtgcgctttgtggttcatttcgatatcccgcgcaatatcgagtcctat
taccaggaaaccggccgtgccgggcgcgatggcctgcctgctgaagccctgctgctgtac
gatccggccgatatggcctggctgcgccgctgtctggaggagaaaaaacaggggccactg
caggatattgaacgtcataagctgaatgcgatgggggcctttgccgaggcacagacctgc
cgacgtctggtgctgctgaactatttcggtgaagggcgtcagcaggcgtgcgataactgc
gatatttgcctggatccgccgcgtcgctacgatggcctggtcgaagcgcaaaaagcgctt
tcctgcatctatcgcgtcggccagcgctttggcatgggctatatcgttgagatcttgcgc
ggtgccaacaaccagcgtattcgcgatatgcagcacgataagctgccggtttacggcatc
gggcgcgatcaaaaccatgaacactggaccagcgtgctgcgccagctgatccacctcggt
ttggtgacgcagaatatcgctatgtactcggctctgcaattaaccgaagccgcccgtccg
gtgctgcgcggtgaagtgtccctgttgctggccgtgccgcgcctggtcagtgtgaaaaca
cgcggcagcagccagaaatccttcggcggcaactacgatcgcaagctgtttgccaaattg
cgcaaactgcgcaaagcgattgccgatgaagacaacctcccgccctacgtggtgtttaac
gacgcgacgctgattgaaatggcggagcagatgccgatcaccgcatcagagatgctgagc
gttaacggcgtcgggcacaaaaaactggagcgctttggcaagccgttcctgttgatgata
aaggaacatatcgacggcggtgatgacgaataa
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