Erwinia amylovora CFBP1430: EAMY_0287
Help
Entry
EAMY_0287 CDS
T01197
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eam03019
]
EAMY_0287 (cafA)
03009 Ribosome biogenesis [BR:
eam03009
]
EAMY_0287 (cafA)
Messenger RNA biogenesis [BR:
eam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EAMY_0287 (cafA)
Ribosome biogenesis [BR:
eam03009
]
Prokaryotic type
rRNA processing factors
EAMY_0287 (cafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CBA19229
UniProt:
D4HUV6
LinkDB
All DBs
Position
339458..340927
Genome browser
AA seq
489 aa
AA seq
DB search
MTAELLVNITPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLEKAAFLHASDIMPHTECVAGDEKKNFIVRDISELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIDSEAERNRLKEVVAAYCDELGGYIIRTAAEGVGED
ELASDAAFLKRLWTKVIERKKRNQTRCRLYGEVALSQRILRDFAGAALDRIRIDSRLSFE
QLIEFTREYIPEMTAKLELYTGKQPIFDLFDVENEIQRSLDRKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
LHSLDQALSKDRVKTGVNGFSQLGLVEMTRKRTRESIEHVLCQDCPVCKGRGTLKTVETV
CYEIMREIVRVHHAYDSDRFLVYVSPSVGEALKSDESHALAEVEIFVGKQVKVQVEPLYT
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagctactggtcaatattacgccgtcggaaacgcgagttgcctacatcgac
ggtggcattctgcaggaaattcatattgagcgcgaagcgcgtcgcggcatcgtcggtaat
atttataaagggcgtgtcagccgcgttttaccgggaatgcaggcggcgtttgtggatatc
ggtcttgaaaaggccgcgttcctgcacgcctctgatattatgccgcataccgagtgcgtg
gccggtgacgaaaagaaaaactttatcgtacgcgatatctccgagctggtgcgtcagggg
caggacctgatggtgcaggtagtaaaagatccgcttggcaccaaaggcgcacgtctcact
accgacatcaccttgccatcgcgctacctggtgtttatgccgggggcttcacacgttggc
gtatcgcagcgtattgacagcgaagctgaacgcaaccgtttgaaagaagtggtagcggct
tactgcgacgaactgggcggctatatcattcgtactgccgccgaaggggtcggtgaagat
gaactggcttctgatgccgcatttcttaagcgtttgtggaccaaagtcatcgagcgtaaa
aaacgtaatcagacgcgctgccgcctttatggcgaggtggcgctgtcgcaacgcatcttg
cgtgactttgccggtgcggcgctggatcgcatccgtatcgattcgcggctaagctttgaa
cagctgatcgagttcacccgcgaatacatcccggaaatgacggcgaagctggagctgtat
accggcaagcagccgatatttgacctgttcgatgtcgaaaatgaaattcagcgttcgctt
gaccgtaaagtggagctgaagtccggcggatatctgatcatcgatcagacggaagccatg
accactgtcgacatcaataccggggcgtttgtcggtcatcgcaatctggaagaaaccatc
ttcaataccaatatagaagcgacgcaggccattgcccgccagctgcgtttacgcaatctg
ggcggcattatcattatcgattttatcgatatgaataatgaagaccaccggcgccgggtg
ctgcattccctggaccaggcgttgagcaaagatcgggtcaaaaccggtgttaacggattc
tcccagctggggctggttgagatgacgcgtaagcgaacgcgcgaaagtattgaacacgta
ctgtgccaggattgcccggtgtgcaaagggcgcggcacgttgaaaaccgttgagaccgtc
tgctacgagattatgcgtgagatcgtgcgtgtgcatcatgcctatgactcagatcgtttc
ctggtctacgtttccccatccgtgggagaagcgttaaaaagcgacgaatcgcatgccctg
gccgaagtggaaatctttgtcggcaaacaggttaaagtccaggttgaaccgctctatact
caggagcaatttgacgtggtgatgatgtag
DBGET
integrated database retrieval system
