Erwinia amylovora CFBP1430: EAMY_0351
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Entry
EAMY_0351 CDS
T01197
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eam03016
]
EAMY_0351 (truB)
Enzymes [BR:
eam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EAMY_0351 (truB)
Transfer RNA biogenesis [BR:
eam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EAMY_0351 (truB)
Prokaryotic type
EAMY_0351 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CBA19293
UniProt:
D4HV20
LinkDB
All DBs
Position
407165..408109
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVVARLGQRTDTSDAEGVVVSERPVTFSAEALQQALDSFRGETQ
QIPSMYSALKYQGRKLYEYAREGIEVPRESRSIVVYELLFIRHEGNELELEIHVSKGTYI
RTIIDDLGEKLGCGAHVTLLRRLQVARYPIARMVTLDQLNALTEQALRAGTSPADLLDPL
LMPMDSPASEYPVVNLIGAVAAYFRQGMPVQVAGAPASGLVRVTEGEQRKFIGMAEIADD
GRVAPRRLVVEYSD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgatattcacggcgtgctgttgctggataaacct
cagggcctctcctccaacgatgcgctgcagaaagtaaaacgtctgtataacgccaatcgt
gccggtcataccggcgcgctggatccgttggcgaccggcatgctgcccatctgtctgggg
gaagcgaccaagttttctcagtatctgctggactcggacaaacgttatcgggtggttgct
cgcctcgggcagcgtaccgacacctcggatgcagaaggcgtggtggtcagtgagcggccg
gtgacattcagcgctgaagctctgcaacaggcgctggacagttttcgcggcgaaacgcag
cagatcccgtcaatgtattcggcgctcaaataccagggacgaaagctttacgaatacgcc
cgtgaaggcattgaggtgccgcgtgaatcgcgcagcatcgtggtgtatgaactgctgttt
attcgccatgaaggtaacgagctggaactggagattcacgtttcgaaagggacatacatc
cgtaccatcatcgacgatcttggtgaaaagctgggctgcggtgcgcatgtcaccttatta
cgccgactgcaggtggcccgttatccgattgcaaggatggtcacgctggatcagctgaat
gcgctgaccgaacaggcgctgcgggccggtacgtcgccagctgacctgctcgatccgctg
ctgatgccgatggacagtccggcatctgagtatccggtggtaaacctgattggcgcggta
gcggcctacttcaggcagggcatgccggtacaggtggcaggtgcgccagcaagtggatta
gtgcgcgtcacggaaggtgaacagcgcaagtttatcggtatggcagaaattgctgacgat
ggacgtgtggcaccgcgcaggctggttgtagaatattccgactag
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integrated database retrieval system
