Erwinia amylovora CFBP1430: EAMY_0656
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Entry
EAMY_0656 CDS
T01197
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam03410
Base excision repair
eam03430
Mismatch repair
eam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EAMY_0656 (recJ)
03430 Mismatch repair
EAMY_0656 (recJ)
03440 Homologous recombination
EAMY_0656 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_0656 (recJ)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EAMY_0656 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EAMY_0656 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EAMY_0656 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF7126
Motif
Other DBs
NCBI-ProteinID:
CBA19606
UniProt:
D4HWD0
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All DBs
Position
729309..731027
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AA seq
572 aa
AA seq
DB search
MNSKTELRRREAADVAALPADLHTLLRRLYAHRGVSRACELERGAKNLHPFQSLSGIDQA
VTILQKALLDNLCIMIVGDFDADGATSTALTVLSLRGMGAQNVKYLVPNRFDDGYGLSPE
VVEQAAVRGAQLIVTVDNGISSLAGVALAHQKGIAVIVTDHHLPGEILPDADAIVNPNLS
DCAFPSRALAGVGVAFYLMLALRARLRDDGVNTLPNLAELLDLVALGTVADVVPLDANNR
ILVWQGLSRIRAGKCRPGIRALLEIANRDARQLAASDLGFALGPRLNAAGRLDDMSVGVA
LLLSEDLAQARMLASELDALNQTRKEIEQGMQSEALTLCNRLESASEALPLGIAMYHPEW
HQGVVGILASRLKERFHRPVIAFAPAGDGMLKGSGRSIAGLHMRDVLERLDTLHPGLIVK
FGGHAMAAGLSLQEAKFDEFRQRFADLVGDWLDAESLQGVVWSDGELMAQELTLPTAELL
RDAGPWGQAFPEPTFDGKFKLLQQRLVGERHLKVMVEPLGGGPLLDGIAFNVDTALWPDP
AVKQVELAYKLDVNEYRGNRNVQLIIDHLWAL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtaaaactgaactccgtcgccgtgaggcggcggacgttgccgcactccccgcc
gatctgcacacgttattacgccgtctttacgcccatcgcggcgtctcccgtgcctgtgaa
ctggaacggggtgcgaaaaatcttcacccttttcaatctcttagtggtattgatcaagcc
gtaaccatcctgcaaaaagcgttgctcgacaacctgtgcattatgatcgtgggtgatttc
gatgccgacggcgcgaccagtacggcgctaaccgtgctgtcactgcgcggtatgggcgct
cagaacgtcaaatatctggtgccaaaccgctttgatgacggctacggtcttagccctgaa
gtggtggaacaggcggcggtacgcggggcgcagctgatcgttaccgtcgataacggtatt
tcatcgcttgccggcgtagcgctggcccatcaaaaaggtattgcggtgattgtcaccgat
caccatttaccgggcgagatcctgccggatgcggacgccattgtgaaccccaatctcagt
gactgcgccttcccttcgcgggcgctggcgggggtaggcgtggcgttttatctgatgctg
gcgctgcgcgcccggctgcgtgacgacggcgtaaacaccttgccgaacctggcggaactg
ctggatttagtggcgctcggcaccgttgctgatgtggtgccgctggatgccaacaaccgc
atcctggtatggcaggggttgagccgcattcgcgccggcaagtgccgtcccggcatacgc
gccctgttggagatcgccaatcgcgatgcgcggcagctggccgccagcgatttaggcttt
gccctcgggccacggctgaacgcagccggtcggctggacgatatgtcggttggggtggcg
ctgctgctcagtgaggatctcgcacaggcacgcatgctggccagcgaactggatgcgctc
aaccaaacgcgtaaagagatagagcaagggatgcagtcggaagcgctgacgctgtgcaac
cgtctggagagcgccagcgaagcgctgccgctgggcattgccatgtatcatcctgaatgg
catcagggcgtggttggtattcttgcctcccggctgaaagagcgttttcaccgtccggtg
atcgctttcgcgccggctggggacggcatgctgaaaggctccgggcgttcgattgccggg
ctgcatatgcgtgacgttcttgagcggctggatacgctgcatccggggctgatcgtcaaa
ttcggcgggcatgcgatggcggcgggtttgtcactgcaagaggcaaaatttgacgagttt
cgtcagcgttttgcggatctggttggcgactggctggatgcggaatcgctacagggcgtg
gtgtggtccgatggtgagctgatggcgcaagagttaacgctgcccacggcggaactgcta
cgtgacgccgggccatgggggcaggcattcccggaaccgaccttcgacggcaagtttaag
ctgctacagcagcggttggtgggggaacgccacctcaaggtgatggttgagccgcttggc
ggcggcccgctgctggacggtatcgcttttaacgttgataccgcgctgtggccggatcca
gccgtgaagcaggtcgaactggcctacaagctcgacgttaatgagtatcgtggtaaccgc
aatgtgcagctgattattgaccatctctgggcgctgtag
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