Erwinia amylovora CFBP1430: EAMY_0712
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Entry
EAMY_0712 CDS
T01197
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EAMY_0712 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_0712 (recD)
Enzymes [BR:
eam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EAMY_0712 (recD)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAMY_0712 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
NAT10_TcmA_helicase
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_16
UvrD_C
T2SSE
AAA_28
TrwB_AAD_bind
FtsK_SpoIIIE
SRP54
DUF87
MukB
DEAD
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CBA19662
UniProt:
D4HWI6
LinkDB
All DBs
Position
798091..799938
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AA seq
615 aa
AA seq
DB search
MTLAEALQLAQYQRLLRPLDVQFARMVAAEQQPALMLAAALVSRDAGEGHVCLPLAQLRP
ESFFAGRYPELAQALWQAAGEPEDWQALLLAETAVSDGQQATPLVVYQQRLYLHRMWQSE
GKIAQFIQRQHYPQDLEEKRVRDTLDSYFGQQPDDWQKIAAAVALTRQVAVISGGPGTGK
TTTVAKLLASLIELSPAPPRIELAAPTGKAAARLTESLGNTLRQLQLADRILRSFPLEAT
TLHRLLGALPGSQRMRYHAGNPLHVDVLVVDEASMLDLPMLANLIAALPAHARVIFLGDR
DQLASVEAGAVIGDICRCAEDDYSPPRAVELTRLTGCEVAGREDASASEVRDSICLLRKS
YRFTSSSGIGQLALAVNAGQINRAEQVFSSGFGDIRRHTLSSSEDYRQLLDDCVAGYREY
LKLLHAGATPGQVLAAFGRFQLLCALREGPFGVAGLNERIEQALRLAGLIRRDIALNGKW
YAGRPVMIARNDRALGLFNGDIGIAMPDEDQQLKAYFPLPDGTIKAVQPSRLAPHDTAYA
MTVHKSQGSEFEHTLLVLPNQMMPVLTRELVYTAITRAKQQLTLYADGSVFNSAVKIRTQ
RRSGLVERLNNRATS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacgctggcagaagccttacagctggcacagtaccagcgcttattgcgccctcttgac
gtgcagtttgcccgtatggtggcggctgaacagcagcccgcgctgatgctggcggcggcg
ctggtcagccgcgacgccggggaaggtcatgtttgtctgccgttggcacagctgcgtcct
gaatctttttttgccgggcgttatccggagctggcacaggccctgtggcaggctgccggc
gaaccggaggactggcaggcgctgctgctggcagaaactgcggtcagtgacggccagcag
gccacgccgctggtggtgtatcaacagcggctttacctgcatcgtatgtggcagagcgag
ggaaaaatcgcgcagtttattcagcgtcagcattatcctcaggatctggaggaaaagcgg
gtgcgtgatacgctggatagttatttcggccagcagcccgatgactggcaaaaaatcgcc
gcagcggtagcgttgacgcgccaggtggcggtgatctccggtgggccggggaccggcaaa
accaccaccgtggccaagctgcttgccagcctgattgaattatcgcccgcgccaccgcgt
atcgagctggcggcaccgaccggcaaggcggcggcgcggctgacggaatcgctcggtaat
acgctgcggcagctgcagctggccgatcgcatcctgagaagtttcccattggaggcgacg
acgctgcatcgcctgctgggggcgctgccgggcagtcaacgcatgcgctatcacgccgga
aatccactgcatgttgacgtactggtggtcgatgaagcctcgatgctggatctcccgatg
ctggctaacctgattgccgctttgcccgctcatgcacgagttatcttcctcggtgaccgc
gatcagctggcttcagtagaagccggagcggtgattggtgatatttgccgctgtgcggaa
gatgactacagcccgccgcgtgctgtggagctgacgcgacttaccggttgcgaggtagcg
gggcgcgaagatgccagcgcctctgaggtgcgtgattcgatctgcctgctgcgcaaaagc
taccgcttcacgtcatcttccggcattggccagctggcgctggcggtgaatgccgggcag
attaatcgcgcggagcaggtcttcagcagcggtttcggcgacatccgccgccatacgcta
agcagcagcgaggactatcggcagctgctggatgactgtgttgcaggttaccgtgagtac
ctgaaattgctgcatgccggagcaacaccggggcaagtactggccgcatttggccgcttc
cagctactgtgcgcgctgcgcgaagggccgttcggtgttgcagggctgaatgagcgtatt
gaacaggcgctgcgcctggcagggcttatccgccgcgatatcgcactcaacggcaaatgg
tatgcaggacgcccggtaatgattgcgcgtaatgaccgggcgctgggactgtttaacggt
gatatcggcatcgcgatgccggatgaagatcagcagctgaaggcgtacttcccgttaccg
gatggcacgatcaaggcggtgcagcccagccgcctggcgccgcatgatacggcctatgcc
atgacggtacacaagtcacagggatcggagtttgagcacacgctgctggttttacctaac
cagatgatgccggtactgactcgtgaactggtttataccgcgatcacccgcgccaaacag
cagctaaccctttatgccgacggttcggtgtttaacagtgcggtgaagatacgcacgcag
cgccgtagcgggctggtggaacggttgaataaccgggctacttcttag
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