Erwinia amylovora CFBP1430: EAMY_0936
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Entry
EAMY_0936 CDS
T01197
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_0936 (sbcC)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAMY_0936 (sbcC)
Archaeal homologous recombinant proteins
EAMY_0936 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
AAA_21
ABC_tran
nSTAND3
cobW
AAA_18
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBA19886
UniProt:
D4HXX5
LinkDB
All DBs
Position
complement(1013620..1016982)
Genome browser
AA seq
1120 aa
AA seq
DB search
MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGSGKTTLLDAICLALYHETPR
LKSITQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQNRARGAVDGKLQAPRVELARCA
DNHIVADKAKEKQDVITSLTGLNFERFTKSMMLSQGQFAAFLNAKASDRAELLEELTGTE
IYGRLSSAVFERHKEAKAALDGLRAQAAAMDLLGEEQQQNLAGQLAQLIADEQALTSQQQ
SQQQTLQELQQLDRLQQQQQQLSRQRQQLDEQLQQARQQLAAADLQQQQALKNHEDHQLL
RQQQETLMTEQVIPLDHQLTTLGEQSEQLARERSEHQQSLTARLQESAKIQQLQQDRQAQ
QQQLNQWREAHPHFSHYGEYLPLWRERFSQQQQSEQSLSALSQRLKARQQKVQQQEQALQ
QLSQQAAPLQQQLGSAQQNLNQAQQALAALQQQHSPESLHNALGQFSQLRPQRLLLATLL
PQWQQLSERRSRLKQERQALAHQIQQSSEQLQTLRARWAEKRQHEQDLDKRCRLEQRIAD
LEQQRALLEPGQPCPLCGSENHPAIAEYQALEPSENQQRLNALREEVRVLGEQGSACSAR
LKQQQQQQQCQQQDDLDLARQASDLQQQWHSAAALLALEFTPDQQQQCRDWLAQQEQQEN
QLQQQLNRLEQAMRHRQQQQEALYQQQQAWQQLERQTALHQQEITAARHNLSELEQQLEQ
DRQRARQLRSELAASLAQLKLQLPEDGDYPGWLQTREQQWQQWQQNASELAALLPELAAL
GSRQQALEEERVQQQARLDVLDARSQQQQQILSERQQQRQRLFGDALVATVRQRLNSESE
QHLQTLRQYEQQWQMQQDRINTLTGQHKSLSEQLITLQSRFDEATTRSGQPENLTAQQQA
LQASLQALSVQLRELASQQGQLRQQLEHDAARRSQQQALLVQVAANEQQVEDWSYLHDLI
GSKDGSKFRRFAQGLTLDHLVWLANNQLSRLHDRYQLQRKPQEEALELEVIDTWQGETRR
DTRTLSGGESFLVSLALALALSDLVSHKTRIESLFLDEGFGTLDAETLDSALDALDALNA
SGKTIGVISHVEAMKERIAVQIRLRKVNGLGYSRLELPVG
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttaccctgcgctttaaaaaccttaactcgctgaagggcgaatggaaaatc
gatttcaccgcagaaccctttgccagcaatggcctgtttgccatcaccgggccgaccggc
tcagggaaaaccaccctgctcgatgccatctgccttgccctttaccacgagacgccgcgc
ctgaaaagcatcacccagtcacagaacgacctgatgacgcgcgatactgccgaatgtctc
gcggaggtggaatttgaggtaaaaggcgttgcctggcgcgcattctggagtcagaaccgc
gcacgcggtgccgttgacggcaagctgcaggcgccgcgcgtcgagctggcgcgctgcgca
gataatcatatcgtcgccgataaggcgaaagagaagcaggatgttatcaccagcctgacc
gggctgaacttcgagcgttttaccaaatcgatgatgctgtcacaggggcagtttgccgct
ttcctcaatgccaaagcgagcgatcgcgccgagctgctggaagagctgaccggcaccgag
atctacggccgcctgtcgtcggcggtattcgagcgccacaaagaggcgaaagcggcgctg
gacgggctgcgcgcccaggctgcggcgatggatctgctgggcgaggagcagcagcaaaac
ctggctggccagctggcacagctgattgccgatgagcaggcactcacttcacagcagcaa
agccagcagcagacgttacaggaactgcaacagctggacagattacagcagcagcagcag
cagctttcccgccagcgccagcagttggatgaacagctacagcaggcccggcagcagctt
gctgcggcagatcttcagcagcagcaggcgctgaagaaccacgaggatcaccaactgctt
cgccaacagcaggaaacgctgatgaccgagcaggtcattcctctggatcaccagctcacc
acgctgggcgaacagtctgagcagctggcccgcgagcgaagtgagcaccaacaatcgcta
actgctcgcctgcaggaaagcgctaaaattcagcaacttcagcaggacaggcaggcgcag
cagcagcagcttaatcagtggcgcgaagcacatccccatttttcccattacggcgaatat
ctgccgttgtggcgtgaacgtttcagccagcagcagcaaagtgagcagtcactttcagca
ctaagtcaacggctgaaggcccggcagcaaaaggtgcagcagcaggaacaggctcttcag
cagcttagccagcaggctgcgccgctgcagcagcagcttggatcggcgcagcagaacctt
aaccaggcgcaacaggcgctggccgccttacagcagcagcactcaccggagagcctgcac
aacgcgctggggcagttcagccagctgcgcccgcaacgcctgctgttggctacgctgctg
ccgcagtggcagcagcttagtgaacggcgcagtcggctaaagcaggaacgccaggcgtta
gcgcatcagatacagcaaagcagtgagcagttacaaaccctgcgcgcccgctgggcggag
aaacgccagcatgagcaggaccttgacaagcgctgcaggctggagcagcgcattgccgac
ctggagcagcagcgcgccctgctggagccggggcagccctgcccgctgtgcgggtcagaa
aatcatccggcgattgccgaatatcaggcgctggagccatcagaaaatcagcaacggctc
aacgccctgagggaagaggtccgggtgctcggcgaacagggcagcgcctgtagcgcacgg
ctaaagcagcagcagcaacagcagcagtgccagcagcaggacgacctcgaccttgcccgt
caggcatcggatttgcaacagcagtggcacagcgccgccgccctgctggcgctggaattc
actcccgatcagcagcagcagtgccgcgactggctggcacagcaggagcagcaggagaac
cagcttcagcagcagctcaaccgcctggagcaggcgatgcgccaccgccagcagcagcag
gaggcgctgtatcagcagcagcaggcgtggcagcagcttgaacggcaaaccgccctgcac
cagcaggagataacggcggcacgccacaacctgagcgagctggagcagcagctggagcag
gatcggcagcgggcgcggcagctgcgtagcgaactggcggcaagcctcgcgcagctgaag
cttcagctgccggaggacggtgattatccaggctggctgcaaacccgtgagcaacagtgg
caacagtggcagcagaacgccagcgagctggcagcgttgttgcccgaactggcggcgctc
ggcagccgtcagcaggcgctggaggaggagcgggtgcagcagcaggcgcgtcttgacgtg
ctggatgcccgcagccagcaacagcagcaaatcctgagcgaacgccagcagcagcgccag
cggctgtttggcgatgcgctggtcgccaccgtcaggcagcggctgaacagcgagtcagaa
cagcatttgcaaaccttgcgccagtatgaacaacagtggcaaatgcagcaggatcgaata
aatactctgaccgggcagcataaatcacttagtgaacagttgattaccctacagtcacgc
tttgatgaggcgacaacccgcagcggccagccggaaaacctgacggcgcagcagcaggcg
ctgcaggccagtctgcaggcgctcagtgtgcaattgcgtgaactggccagccagcagggg
cagctgcgccagcagctcgaacacgatgccgcccgccgttcacagcagcaggcgctgctg
gtgcaggtggcggccaatgaacagcaggtggaagactggagctatctccacgatctgatt
ggctccaaagacggcagtaagttccgccgctttgcccagggattaaccctcgatcatctg
gtgtggctggcgaataaccagctaagccgcctgcacgatcgctatcagctgcaacgtaaa
ccgcaagaagaagcgttggaattagaggtgatcgacacctggcagggcgagacccggcgc
gatacgcgcacgctgtccggcggcgagagttttctcgtcagcctggcgctggcgctggcg
ctttcagatttagtcagccataaaacccgcattgaatcgctgtttcttgatgaaggcttc
ggcaccctggatgccgaaacgctggacagcgcgctggatgcgctggatgcgcttaacgcc
agcggcaaaaccatcggggtgattagccacgtcgaggcaatgaaagagcggattgcggtg
cagatcaggttgaggaaggttaacggcctgggttacagcaggctggagctgcccgtcggt
taa
DBGET
integrated database retrieval system
