Erwinia amylovora CFBP1430: EAMY_1080
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Entry
EAMY_1080 CDS
T01197
Symbol
yncD
Name
(GenBank) probable tonB-dependent receptor yncD precursor
KO
K02014
iron complex outermembrane recepter protein
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eam02000
]
EAMY_1080 (yncD)
Transporters [BR:
eam02000
]
Other transporters
Pores ion channels [TC:
1
]
EAMY_1080 (yncD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
CBA20030
UniProt:
D4HYQ5
LinkDB
All DBs
Position
1148564..1150594
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AA seq
676 aa
AA seq
DB search
MVIKQRGGLSELDTPAAVSVVDGDDLRRASAQVNLSENLASVPGLQIQNRQNYAQDLQLS
VRGFGSRSMYGVRGVRLYVDGIPATMPDGQGQTSNIDINSLGKAEVLRGPYSALYGNASG
GVVNIDTLSGSQPATLEAGTYFGSFGSWRNSLKVSGATGDGSEKGDVNYTLSASRFTTHG
YRDHSGTQKDLGNGKLGVRVDDVSTLTLMFNSVSVDASDPGGLSAEEYLANPRQSPRGDT
FNTRKSLDQTQLGLRYQRAFSDSDRLTLTTWHGERHTTQYQSIPQPPQLKPAHSGGVIVL
ERKYQGIDTRWQHEGQLAAVPVTLTGGIDYETMTEHRQGFQNYSLVSGVATFGEKGAQRR
NEKNTLWNLDPYLQTSWRLTPKLTLDAGLRYSTVSFDSTDDYITAKNGDDSGSARYHRLL
PMGALNYAVSDAWNVYLSAGRGFETPTINELSYRSVNGSITGLNLGLKPASSDNIELGSK
TRIGYGLLTAALFQTDSDNELVADDNENGRSVYKNAGETRRRGLELGFDQQFASDWRVKL
AWTLLDARYRNETCNVKRICTPAGHRLPGIARNMAYASLQYAPESGWHAGADIRYMSNIQ
ANDANDAQAPSYTVASLNGGYRFNWNKWSLDLFSRVDNLFDRRYIGSVIVNEGNSRYLEP
APGRNWGGGATISYQF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcaaacagcgtggcgggctgtccgaactggatacgcccgctgcggtcagcgtg
gtcgatggtgacgatctgcgccgcgccagcgcacaggttaacctctctgaaaacttagcc
agcgtaccagggctgcaaatccaaaatcgccagaactatgcgcaggatctgcagctgtcg
gtgcgcggtttcggcagccgttcaatgtacggcgtgcgcggcgtgcggctgtatgttgac
ggcattcccgccactatgccggatggtcagggacagacgtcaaatatcgatatcaactcg
ctgggcaaagcagaagtgctgcgcgggccttactccgcactgtatggcaatgcctccggt
ggcgtggtcaatattgataccctctccggcagccagcctgctacgctggaagcagggact
tactttggcagcttcggctcgtggcgtaacagtcttaaggtcagcggcgcgaccggggat
ggcagcgagaaaggggacgtcaattacaccctctccgcatcgcgctttaccacccacggc
taccgcgatcacagcggcacgcagaaggatctcggtaacggcaagctcggcgtacgggtg
gatgacgtcagtaccctgacgctgatgttcaacagcgtatcggttgacgccagcgatccc
ggtgggttgagcgcagaagagtaccttgccaatccgcgacagtcgccacgcggcgatacg
ttcaatacccgtaaaagcctcgatcaaacgcagcttggtctgcgctaccagcgcgcgttc
agcgatagcgatcggttgacgctgaccacctggcacggcgagcgccacaccacccagtat
cagtcgattccgcaaccgccgcagctgaaacctgctcattcgggcggggtgatcgtgctg
gagcggaaatatcagggcattgatacacgctggcagcacgagggtcagctggctgcggtg
ccggtaacgctgaccggcggaattgactatgaaaccatgaccgagcaccgccagggcttc
cagaactacagtctggtaagtggcgttgcgactttcggtgagaagggcgcgcagcggcgt
aatgaaaaaaacaccctgtggaacctggacccttatctgcaaaccagctggcggttgacg
ccgaagttaacgctggatgccgggctgcgctacagcaccgtcagttttgattcaaccgac
gactacatcactgcgaaaaacggcgacgacagcggcagcgcgcgttaccatcggctgttg
ccgatgggggcgctgaattatgcggtcagtgacgcatggaatgtttatctctccgccggt
cgcggcttcgaaaccccgacgattaacgagctgtcctatcgttcggttaacggcagcatt
accgggctaaatctgggattaaaaccggccagcagcgataacatagagttgggtagcaaa
acccgcatcggttatggcctgctaaccgcagcgctgttccagaccgatagcgataatgag
ctggtggcagatgacaatgaaaatggccgcagcgtttacaaaaacgccggggaaacgcgc
cgccgtgggctggagctgggcttcgaccagcagtttgcttcggactggcgggtgaagctt
gcctggacgttgctggatgcccgctaccgcaatgaaacctgtaatgtaaagcgcatctgc
accccggcgggccaccgtctgccgggtattgcgcgcaatatggcatacgcctcgctgcag
tatgccccggaaagcggctggcacgccggggcggacattcgctatatgagcaacattcag
gccaatgacgctaacgatgcccaggccccgtcttataccgttgccagcctgaatggcggc
tatcgcttcaactggaacaaatggtctctggatctgtttagccgcgtcgataacctgttc
gaccgtcggtacatcgggtcggtgatcgtcaacgaaggcaacagccgctacctcgaaccg
gcaccggggcgtaactggggcggtggtgccaccatcagctatcagttttga
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