Erwinia amylovora CFBP1430: EAMY_1122
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Entry
EAMY_1122 CDS
T01197
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam03030
DNA replication
eam03430
Mismatch repair
eam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAMY_1122 (holA)
03430 Mismatch repair
EAMY_1122 (holA)
03440 Homologous recombination
EAMY_1122 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eam03032
]
EAMY_1122 (holA)
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_1122 (holA)
Enzymes [BR:
eam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EAMY_1122 (holA)
DNA replication proteins [BR:
eam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EAMY_1122 (holA)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EAMY_1122 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CBA20072
UniProt:
D4HYU7
LinkDB
All DBs
Position
complement(1185882..1186913)
Genome browser
AA seq
343 aa
AA seq
DB search
MIRIYPEQLGAQLREGLRACYLLSGNEPLLLQEAQDAIRAAAQQQGYTEHVSVALEIGTD
WQEIFSACQALSLFASRQTLLLTLPENGPNAAMSEQLLTLSTLLHSDILLILRATRLTKA
QENSAWYKAFSANAVAVPCQTPEHGQLPRWVTMRAKKLNLTLDDAANQLLCYCYEGNLLA
LSQALERLSLMWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLAGKSKRALHILRQMRAED
SEPVILLRTLQRDLLLLLTLQRQMAYTPLRTLYDRHRVWQNRRALFAEALQRLTATRLAK
AITLLTQTELTLKQDYGQTVWAELETLTLMLSLPTFPASFCDA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatttacccggagcaactcggcgcgcagcttcgtgaagggctgcgcgcctgc
tatttattgagcggcaatgaacctttgctgttgcaggaagcacaggatgctatccgcgca
gcagcccaacagcaggggtataccgaacacgttagcgtggcgctggagatcgggaccgac
tggcaggaaattttctccgcctgtcaggcattgagcctgttcgccagccgccagacgtta
ctgctcactttgcctgaaaatggcccgaatgccgcgatgagtgaacagctgctaaccctt
tctaccctgctgcacagcgatatcctgctgattctgcgcgcaacccgactgactaaagca
caggaaaacagcgcctggtataaagctttcagcgccaatgcggtagcggttccctgtcag
acacccgaacacggtcagctgccccgctgggtgactatgcgggcgaagaagcttaacctg
acgctggatgatgccgcaaatcagctgctgtgttactgctacgagggtaatctgctggcg
ctttctcaggcgctggaacggctttcgctgatgtggccagacggcaagctgacgctgcca
cgcgtcgagcaggcggttaacgatgcggcacattttacgccgttccactgggtggatgct
ttgctggcaggcaaaagcaaacgtgcgctgcatattctgcggcagatgcgtgctgaagac
agtgagccggtgatcctgctgcgcaccctgcaacgcgacctgctgctgctgctgacgtta
cagcggcagatggcatataccccgctgcgcaccctgtacgatcggcatcgcgtgtggcaa
aaccgccgggcgctattcgctgaggccctgcaacgcctcaccgccacacggttggcgaaa
gcgataacgctgctgacccaaaccgagctgacgttgaagcaggattatggccagactgtc
tgggcggagctggaaacgctgacgctgatgttgagtctccccactttcccggcgagtttc
tgtgatgcgtga
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