Erwinia amylovora CFBP1430: EAMY_1348
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Entry
EAMY_1348 CDS
T01197
Symbol
himD
Name
(GenBank) Integration host factor beta-subunit (IHF-beta)
KO
K05788
integration host factor subunit beta
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eam03032
]
EAMY_1348 (himD)
03036 Chromosome and associated proteins [BR:
eam03036
]
EAMY_1348 (himD)
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_1348 (himD)
DNA replication proteins [BR:
eam03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EAMY_1348 (himD)
Chromosome and associated proteins [BR:
eam03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EAMY_1348 (himD)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EAMY_1348 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
MDMPI_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CBA20298
UniProt:
D4I091
LinkDB
All DBs
Position
1419616..1419903
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AA seq
95 aa
AA seq
DB search
MTKSELIERLAGQQSHIQAKVVEDAVKEMLEHMATTLSEGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYGG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaactgattgagaggcttgcaggccagcaatctcatattcaggcgaaa
gtcgttgaggatgcggtaaaagagatgctggagcacatggcaacgacgttgtcagagggt
gaacgcatcgaaatccggggatttggcagcttctctttgcactatcgggcacctcgtacc
ggccgtaacccgaagacgggtgacaaagtggagttggaaggtaaatacgttccacacttc
aagcccggaaaagagctgcgcgatcgcgccaatatatacggcggctga
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integrated database retrieval system
