Erwinia amylovora CFBP1430: EAMY_1360
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Entry
EAMY_1360 CDS
T01197
Symbol
ycbB
Name
(GenBank) Uncharacterized protein ycbB
KO
K21470
L,D-transpeptidase YcbB
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eam01002
]
EAMY_1360 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eam01011
]
EAMY_1360 (ycbB)
Peptidases and inhibitors [BR:
eam01002
]
Cysteine peptidases
Family C82
EAMY_1360 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
eam01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EAMY_1360 (ycbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
CBA20310
UniProt:
D4I0A3
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All DBs
Position
1435412..1437259
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AA seq
615 aa
AA seq
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MLLQKSSLIQALAVGCSLLSGLAVLPGAVAGTPPVFTAVVPAVSVTQSQQQITAALPHGI
MPFYLKNLVPLYASNHMQLMWQDPQALRLFEQQLAEVALSGVQPQFSQWVKQLTDPAIKG
LARDVVLSDAMLGYLQFTSSVPAKGEAWLYSTVPYRLEAPSTTVINQWQQALAQGNLDSF
VRSLAPRHPQYVRMHQALKSLLADTRPWPQIVDKQTLRPGQISNDVPALRDILQRNGMMS
AANEPARPPVEVVGAVNAPLVHDDDNAQPDTGLGGQGENSAVVSPSAKISGDASNAAAEP
NVFTGQAALGSPTNTYTPQLVEALKRFQRWQGLEADGAIGLRTRQWLNVSPPQRATLLAL
NIQRLRLLPDDMHNGIMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVL
NPPWNVPTTLVRKDIVPKVKQDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSMVSAASFP
YRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANL
LLHDVGWDDARISGTLKEGNTRFVPIRHRIPVNLYYLTAWVAEDGLPQFRTDIYNYDYTA
RSGTQVLARAGQLLL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcagaaatcatcactcattcaagcgcttgccgtcgggtgcagcctgctttcc
gggctggcagttttacccggcgcggtagcaggtacaccaccggttttcactgcggtggtg
ccggctgtcagcgtcacgcagagccagcagcaaattacggccgctttacctcacggtata
atgccgttttatctcaaaaaccttgtgccgctgtatgccagcaatcatatgcagctgatg
tggcaggatcctcaggcgctcaggctgtttgagcaacagctggctgaagttgccctttct
ggcgtacaaccgcagttttcccaatgggtaaaacagctgacggatcccgccattaaaggg
ttggcgcgggatgtggtgctatctgatgcgatgttgggttatctgcagttcacctccagc
gtgcccgctaaaggcgaagcctggctttacagcacggtgccgtaccggctggaagccccg
tcaacgacggtgataaaccagtggcagcaagcccttgcccagggcaacctcgatagcttt
gtgcgctctctggctccccggcatccgcagtatgtgcgcatgcatcaggcgctgaaatcc
ctgctggcggatacccggccgtggccgcaaattgtcgataagcagacgctgcgaccgggc
cagatcagcaatgacgtaccggccttgcgtgatatcctgcaacgaaacggaatgatgtca
gcggcaaatgagcctgccaggccaccggtggaagtggtaggtgcggtgaatgcccccctg
gtgcatgacgatgataatgcgcaaccggacacaggcttaggtggtcagggggaaaacagc
gccgttgtcagcccgtcggcgaagatatcaggcgatgcctccaacgcagccgcagagcca
aatgtctttaccgggcaggcggcgttgggcagcccgacgaatacctatacgccgcagctg
gtggaggcgctaaaacggttccagcgttggcaagggctggaggccgatggcgcgataggg
ctgcgcacccgccaatggctgaacgtctcgccgccgcagcgggcgacactgctggcgtta
aatattcagcgtctgcgcctgctgcccgatgatatgcacaacggcataatggttaacatc
ccaaattattcgctggcttactacgtcaatggccgtgaaatactgtcttcccgcgtcatc
gtcggccgcccggaccgtaaaacgccattgatgcgtagcgcgttgaataatgtcgtgctt
aacccaccgtggaacgtgccaaccacgctggttcgcaaagatattgtgccgaaggtgaaa
caggacccgatgtatctgtataaacacggttataccttgcttgcaggctggagtaacgaa
gcagaagtggttgacccttcaatgattaactggagtatggtttctgctgcttctttcccg
taccgcatccgccaggcgcctggccccaccaactcgctggggcgctacaagttcaatatg
ccaagctctgacgctatctacctgcatgacacgccaaatcatggcctgtttcagaaggat
attcgcgctctgagttccggctgcgtaagggtgaatcgcgcttccgatctggctaatttg
ctgctgcatgatgtgggctgggacgacgcgcgcatctccggcacgctgaaggaggggaat
actcgcttcgtgccgatccgccatcgtatcccggtcaacctctattatttgaccgcctgg
gtagcggaagatgggctgccgcagtttcgtacagatatttacaattatgactacaccgcg
cgttcaggtactcaggtgctggcgcgggctgggcaattgttgctctaa
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