Erwinia amylovora CFBP1430: EAMY_1408
Help
Entry
EAMY_1408 CDS
T01197
Symbol
ycdC
Name
(GenBank) HTH-type transcriptional regulator rutR
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eam03000
]
EAMY_1408 (ycdC)
Transcription factors [BR:
eam03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EAMY_1408 (ycdC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
COQ9_N
Motif
Other DBs
NCBI-ProteinID:
CBA20358
LinkDB
All DBs
Position
1485109..1485804
Genome browser
AA seq
231 aa
AA seq
DB search
MRLAVTPQPQMNYGVKVNSVNHLPAKASTRRSRAVAAKRSAILAAALEFFSQYGIHGTTL
DKVAERAGVSKTNLLYYFPSKEELYIAVLKDLLDVWLTPLRALRPDQPPLDAIRNYIRLK
LEVSRDYPQASRLFCLEMLQGAPLLKAELAGGLRDLVEEKTAVIEAWMLQGELSAVQPQH
LIFMLWATTQHYADFATQVQAITGQTLMDEHFFNQTVENVQRMVVEGIRVR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
gtgcgattggctgttacccctcaaccgcagatgaattatggagtcaaggtgaattctgtc
aatcatttacctgcaaaagcctctacgcgccgttcgcgcgcggtagccgcgaaacgttcg
gcgatactggcggccgcgctggaatttttctcacagtatggcattcatggcactaccctg
gataaggtagctgaacgcgcaggtgtctcaaaaactaatcttctctattatttcccgtca
aaagaagaactctatattgcggttttgaaagatttgctcgatgtctggctcaccccgctg
cgcgcgctgcgccccgaccagccgccgcttgatgctattcgcaactatatccgccttaag
ctagaagtatcgcgagactatccgcaggcatccaggctgttctgtctggaaatgctgcag
ggtgcgccgctgttaaaagcagagctggcaggtggactgcgtgatcttgtggaggaaaaa
acagcggttatagaagcctggatgttacagggcgaactgtcggcggtgcagccacaacat
ctgatctttatgctgtgggccaccacccagcactatgcggattttgccacccaggtacag
gcaataaccgggcagacccttatggacgaacacttctttaatcagacggtggaaaacgtc
cagcgcatggtggttgagggcatacgcgtacgctaa
DBGET
integrated database retrieval system
