Erwinia amylovora CFBP1430: EAMY_1480
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Entry
EAMY_1480 CDS
T01197
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam03030
DNA replication
eam03430
Mismatch repair
eam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAMY_1480 (holB)
03430 Mismatch repair
EAMY_1480 (holB)
03440 Homologous recombination
EAMY_1480 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eam03032
]
EAMY_1480 (holB)
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_1480 (holB)
Enzymes [BR:
eam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EAMY_1480 (holB)
DNA replication proteins [BR:
eam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EAMY_1480 (holB)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EAMY_1480 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Cytochrom_C
Motif
Other DBs
NCBI-ProteinID:
CBA20430
UniProt:
D4I105
LinkDB
All DBs
Position
1549328..1550332
Genome browser
AA seq
334 aa
AA seq
DB search
MNWYPWLNHSYRQIIAQHLAQRGHHALLIQALPGMGDDALIWGIGRWLMCRQPQGLKSCG
KCHACQLMLAGNHPDWYRLEADKGKNALGIDAVRGVTDKLYHHAQQGGAKVVWLPDAQQL
TEAAANALLKTLEEPPKNTWFLLSSRQPSRLLPTLRSRCLLWHLAPPEERQGLQWLQKHC
VAGIDERRAALRLSAGAPAAALAFLDDKHWQQRLQVCQALPAALYDDLLSLLPVLNHDDV
ARRIAWLCSLLVDAVKWQQGGGLFISNIDQQAVVIRLASLLPASVLDASLHQWMVCRDRL
LTVASVNRELLLTEQLLAWETRVKPLLVDSTFKE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtacccgtggctcaaccacagttatcggcagattatcgcgcagcacctggcg
cagcgcggccatcatgcactgctgattcaggctctgcccggcatgggggacgacgcgtta
atctggggcatcgggcgctggctgatgtgccgccagccgcaggggctgaaaagctgcggt
aagtgtcatgcctgtcagctgatgctggccggtaatcaccctgactggtatcggttggaa
gccgataagggcaaaaacgccctgggtatcgatgcggtgcgcggcgtaacggataagctt
taccatcatgcacagcagggaggtgcaaaagtagtctggctgccggatgcgcagcagctt
actgaagcggccgctaatgcgctgttgaaaaccctcgaagagccgccgaaaaatacctgg
tttttactgagcagtcgtcaaccctctcgcctgctgcctacgctgcgcagccgctgcctg
ttatggcatctggcgccgccggaagagcggcaaggcttgcaatggctacagaaacactgt
gttgcaggcattgatgagcgtcgcgccgcgctgcggctgtcggccggggcgcccgcagcg
gcactggcttttctggatgataaacactggcagcagcgcctgcaggtgtgtcaggcgctt
cctgctgcgctgtacgacgatctgctgagcttactgccagtgttaaatcatgatgatgtg
gcacggcgtattgcctggctgtgttccctgctggttgatgcagtgaaatggcagcagggt
ggggggctgtttatcagcaatattgatcagcaggcggtggttatccgcctcgccagcctg
ttaccggccagcgtgcttgatgccagcctgcaccagtggatggtctgtcgcgaccggctg
ttgacggtggcgtcagttaaccgcgaactgttgctaacggaacagctgctagcctgggaa
accagggttaaaccgctattggtcgattccacatttaaagagtaa
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