Erwinia amylovora CFBP1430: EAMY_1534
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Entry
EAMY_1534 CDS
T01197
Symbol
ycfB
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
EAMY_1534 (ycfB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eam03016
]
EAMY_1534 (ycfB)
Enzymes [BR:
eam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
EAMY_1534 (ycfB)
Transfer RNA biogenesis [BR:
eam03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
EAMY_1534 (ycfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
Asn_synthase
QueC
DUF7411
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
CBA20484
UniProt:
D4I159
LinkDB
All DBs
Position
complement(1601286..1602395)
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AA seq
369 aa
AA seq
DB search
MSNSQKKVIVGMSGGVDSSVSAWLLQQQGFQVEGLFMKNWEEEDGEEYCTAAEDLADAQA
VCDKLGIYLHTINFAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAEDLG
ADYIATGHYVRRQDVDGKSRLLRGLDGNKDQSYFLYTLSHQQIAQSLFPVGELAKPEVRR
IAEQLELVTAKKKDSTGICFIGERKFTEFLARYLPAQPGAIISVDGVNVGQHQGLMYHTL
GQRKGLGIGGRKEANEDPWYVVDKDVTNNLLVVAQGHDHPRLMSQGLTAQQLHWVDRNVL
SAPLRCAVKTRYRQEDIPCTVIPLDAERIEVRFDYPVAAVTPGQSAVFYLDEVCLGGGII
EQRLPLINA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacagccagaaaaaagtgatcgtcggcatgtccggcggcgtggactcctccgtt
tcagcctggttgctgcagcaacagggctttcaggttgaaggcctgtttatgaagaactgg
gaggaggaagatggtgaagagtattgcaccgcagcagaagacctggccgatgcgcaagcc
gtctgcgacaaacttggtatatatcttcatacgatcaactttgccgccgagtattgggat
aacgtcttcgagcacttcctggcggagtacaaagccgggcgtacacccaatcccgacatt
ctttgtaataaagagatcaagttcaaagcctttctggagtacgccgcggaagacttgggc
gcagattacatcgccactggtcactacgtgcgccgacaggatgtagacggcaaaagccgt
ctgctacgcggtctggacggcaataaagaccaaagttactttctgtataccctcagtcat
caacaaatcgcgcaaagcctgtttccggttggagaactggctaaacctgaagtgcgccgc
attgcggagcagctggagctggttactgcgaagaaaaaagattcaaccggtatctgcttt
atcggtgagcgcaaattcaccgagtttcttgcacgctatttaccggcacagcctggagcg
attatctccgttgatggagttaatgttgggcaacatcagggcctgatgtaccacaccctt
ggtcagcgcaaagggctgggtatcggtggcagaaaagaggctaatgaagatccctggtat
gtggttgataaggatgtgaccaataacctgctggtggtggcgcaagggcacgatcacccc
cgcctgatgtcgcaaggtctgactgcccaacagctgcactgggtcgacagaaatgtgtta
tccgccccgttgcgctgtgcggttaaaacccgctatcgccaggaggatattccctgcacg
gttatcccccttgacgctgaacgcattgaggtgcgttttgattatccggtcgcggccgtt
acgccggggcagtccgcggtcttttatctcgatgaagtctgccttggtggcggcatcatt
gaacaacgtctgccgttaattaacgcctga
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