Erwinia amylovora CFBP1430: EAMY_1908
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Entry
EAMY_1908 CDS
T01197
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eam03032
]
EAMY_1908 (topA)
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_1908 (topA)
Enzymes [BR:
eam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EAMY_1908 (topA)
DNA replication proteins [BR:
eam03032
]
Prokaryotic type
DNA Topoisomerases
EAMY_1908 (topA)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAMY_1908 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
CK_II_beta
DUF7784
DUF1722
Motif
Other DBs
NCBI-ProteinID:
CBA20858
UniProt:
D4I3D5
LinkDB
All DBs
Position
complement(1972961..1975558)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGTTVKKSTDSTTSKPTKKVK
KDEKTALVNRMGVDPFHGWAANYQILPGKEKVVSELKALAEKADHIYLATDLDREGEAIA
WHLREVIGGDESRYSRVVFNEITKNAIRHAFDKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKVARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWELNADLTTPKGVDLPMQVTH
QHDKPFRPINRDQTYAAVSLLEKARYVVVDREDKPTGSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDALSMARGYIEEEFGAKYLPKTANLYSSKEN
SQEAHEAIRPSDVKVQSEQLKDMETDAQKLYQLIWRQFVACQMMPAQFDSTTLTVEAADF
KLKAKGRTLRFDGWTRVMPALRKGDDDRTLPAVEVGSELSLQQLLPSQHFTKPPARFSEA
SLVRELEKRGIGRPSTYASIISTIQDRGYVKVESRRFYAEKMGEIVTDRLEENFRELMNY
DFTAHMEDNLDKVANNQAQWKAVLDKFFGDFSQQLEQAEKDPEEGGMQPNQMVVTSIECP
SCSRQMGIRTASTGVFLGCSGYALPPKERCKQTINLIPENEVLNILEGDDAETNALRARR
RCGKCGTAMDSYLIDNQRKLHVCGNNPECDGYEIEQGEFRIKGYDGPVVECEKCGGEMHL
KMGRFGKYMACTNDDCKNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPRVEELQRFRDRLPEKLRYLADAPAEDAEGNKAVVRFSRKNKQQYV
STEKEGKATGWSAFYVDGKWEVAKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagctctcgtaatagttgagtccccggcaaaagccaaaacgatcaataaatat
ctcggaaatgactacgtggtgaaatccagcgtcggtcacattcgtgatttgccaaccagt
ggaacaacagttaaaaagagcactgactctacaaccagtaaacccaccaaaaaggtcaaa
aaagacgagaagacggcgctggtcaaccgtatgggcgttgacccatttcatggctgggca
gcaaattaccaaatcctgcccggcaaagaaaaagtggtgtctgaactcaaagcgctggcg
gaaaaagctgaccatatctatctcgctaccgatctcgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtgatcggcggtgatgaatcgcgctacagccgcgtggtgtttaat
gaaataaccaaaaatgctattcgtcatgcgtttgacaagccgggtgagctgaatatcgac
cgcgttaatgcccagcaggcgcggcgttttatggatcgcgtggtgggctatatggtctca
ccgctgctgtggaaaaaagtcgcccgcgggctgtccgccgggcgtgtccagtcggtagcg
gtgcgtctggtcgtcgagcgcgaacgcgaaataaaggctttcgtgcccgaagagtactgg
gagttgaatgccgatttgacgacgccaaaaggtgtcgatttgcccatgcaggtaacccac
cagcacgataaacctttccggccaattaatcgtgaccagacttatgccgcggtcagcctg
ctggaaaaagcgcgctatgtggtcgtcgatcgtgaagataagccgaccggcagcaagcct
ggcgctccgtttatcacatctacattgcaacaggccgccagcacccgcctcggtttcggc
gtgaaaaaaaccatgatgatggcacagcgtttgtatgaggccgggcatattacctacatg
cgtaccgactccaccaacctgagtcaggatgcgctaagcatggcgcgcggttatattgaa
gaggaattcggggcgaaatatctgccgaaaaccgccaacctctacagcagtaaagagaat
tcacaggaagctcacgaagccattcgaccgtctgatgtgaaagtgcagtctgagcagctg
aaagatatggaaaccgatgcgcagaagctgtatcagctgatttggcgtcagttcgtcgcc
tgccagatgatgcctgcccaatttgattccaccaccctgaccgtggaagcagcggatttc
aaactcaaggcgaagggacgtacgctgcggtttgatggctggacgcgagtcatgccggca
ctgcggaaaggtgacgacgatcgtactctgccagcggtagaagtaggcagcgagttgagc
ctgcaacaactgctgccaagtcagcactttaccaaaccgccagctcgtttcagtgaagcc
tcgctggtgcgcgagctggaaaaacgcggtattggccgtccatcaacctatgcttctatc
atctcaaccattcaggatcgcggctacgtgaaagtggaaagccgtcgattctacgctgaa
aaaatgggggagatcgttaccgaccgccttgaagagaacttccgtgagctgatgaattat
gacttcaccgcacacatggaagacaatctggacaaggtggcgaataaccaggcgcagtgg
aaagcggtacttgataagttcttcggtgattttagccagcagctggagcaggcagagaaa
gatccggaagagggcggcatgcagcctaaccaaatggtagtgacgtccattgagtgcccg
tcctgcagccggcaaatgggtattcgtaccgccagcaccggcgtgttccttggctgttcc
ggctatgccctgccgccgaaggagcgctgtaaacagaccatcaacctgatccccgagaat
gaagtgcttaatattctcgaaggtgatgatgcggaaaccaacgcgctgcgcgcgcgccgt
cgctgcggtaaatgtggaacggcgatggacagttacctgatcgataaccagcgcaaactg
cacgtttgtggtaacaacccggaatgcgatggctacgagattgaacagggtgagttccgc
atcaaaggttatgacgggccggtggttgaatgtgagaagtgcggtggtgaaatgcacctt
aaaatggggcgtttcggcaagtacatggcctgcacgaatgacgactgtaagaacacgcgt
aaaattctgcgtaacggggatgttgcgccaccgaaagaagatccggtaccgctgccagaa
ctgccttgtgaaaagtcagatgcatactttgtcttgcgtgatggtgctgccggtgtattc
cttgcggcaaacaccttccccaaatcgcgtgaaacccgcgcgccgcgggtagaagagctg
caacgattccgcgatcgcctgccagagaagttgcgctatttggccgatgctccagcggaa
gacgcggaggggaacaaggcagtggtgcgcttcagtcgcaaaaacaaacagcagtatgtc
agcaccgaaaaagagggtaaggccaccggctggtccgctttctatgttgatggtaaatgg
gaagttgcaaagaaatag
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